G1477578 (LOC100194703)


Basic Information

Item Value
gene id G1477578
gene name LOC100194703
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66557037 ~ 66557512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1689884
gagaagacaaggtgagtactaccatcagtcctgtgtcatgccaacagtaaagcatcctgagaccattcatgtgtggggttgcttctcagccaagggagtgggctcactcacaattttgcctaagaacacagccatgaataaagaatggtaccaacacatcctccgagagcaacttctcccaaccatccaggaacagtttggtgacgaacaatgccttttccagcatgatggagcaccttgccataaggcaaaagtgataactaagtggctcggggaacaaaacatcaatattttgggtccatggccaggaaactccccagaccttaatcccattgagaacttgtctTCAATcgtcaagaggtgggtggacaaacaaaaaccaacaaattctgacaaactccaagcattgattatgcaagaatgggctgccatcagtcaggatgtggcccagaagttaattgacagcatgccagggc

Function

NR:

description
transposase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1689884 True 476 TUCP 0.47 1 66557037 66557512

Neighbor

gene id symbol gene type direction distance location
pax7a pax7a coding upstream 29430 66465455 ~ 66527607 (+)
LOC110494417 LOC106565918 coding upstream 155850 66391396 ~ 66401187 (+)
LOC110516128 LOC106565694 coding upstream 907061 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 978093 65572367 ~ 65578944 (+)
LOC118940487 oncmyk-dab coding upstream 1004380 65523697 ~ 65552657 (+)
park7 park7 coding downstream 1965 66559477 ~ 66566440 (+)
kcnab2a kcnab2 coding downstream 9267 66566779 ~ 66780792 (+)
akr7a3 LOC100194670 coding downstream 228004 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 241255 66798767 ~ 66840370 (+)
aldh4a1 LOC106565909 coding downstream 286509 66844021 ~ 66853631 (+)
G1477576 NA non-coding upstream 501 66556260 ~ 66556536 (+)
G1477570 NA non-coding upstream 5311 66551513 ~ 66551726 (+)
G1477510 NA non-coding upstream 34606 66521122 ~ 66522431 (+)
G1477377 NA non-coding upstream 118575 66430920 ~ 66438462 (+)
G1477381 NA non-coding upstream 129481 66427220 ~ 66427556 (+)
G1477594 NA non-coding downstream 21424 66578936 ~ 66579231 (+)
G1477598 NA non-coding downstream 25407 66582919 ~ 66583146 (+)
G1477601 NA non-coding downstream 29439 66586951 ~ 66587172 (+)
G1477751 NA non-coding downstream 256409 66813921 ~ 66814333 (+)
G1477758 NA non-coding downstream 266314 66823826 ~ 66824068 (+)
G1477313 NA other upstream 266589 66288872 ~ 66290448 (+)
G1476898 NA other upstream 773702 65781779 ~ 65783335 (+)
G1476569 NA other upstream 1090270 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1229874 65325877 ~ 65327163 (+)
G1476510 NA other upstream 1252909 65303417 ~ 65304128 (+)
G1477697 NA other downstream 159861 66717373 ~ 66718688 (+)
LOC110494429 LOC106565956 other downstream 310013 66867211 ~ 66867881 (+)
G1478504 NA other downstream 1104475 67661987 ~ 67663649 (+)

Expression


Co-expression Network