G1477594


Basic Information

Item Value
gene id G1477594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66578936 ~ 66579231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1689902
caaatcgtttagagagaaatagtcctataataactacaacctaaaacttcttacctgggaaaattgaagactcatgttaaaaggaaccaacaGGAGGAAAATGGTGCCGTAGAGAGAACAGTGTTTCAGTGAGCTCTCGTGGCATtcgtaaatgtatatttttacatTAATCTCCTAGCTTGAAAAAGTGGTAGAATTGGCTAAATAAGTTACCACATAATGAGTCTTGACGACTATTTCGCAAAAATCTCCGACAACATGCCCAACAGAACTACTAAGAAGTCGACCAAAACCAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106561506

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1689902 True 296 lncRNA 0.38 1 66578936 66579231

Neighbor

gene id symbol gene type direction distance location
park7 park7 coding upstream 12496 66559477 ~ 66566440 (+)
pax7a pax7a coding upstream 51329 66465455 ~ 66527607 (+)
LOC110494417 LOC106565918 coding upstream 177749 66391396 ~ 66401187 (+)
LOC110516128 LOC106565694 coding upstream 928960 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 999992 65572367 ~ 65578944 (+)
akr7a3 LOC100194670 coding downstream 206285 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 219536 66798767 ~ 66840370 (+)
aldh4a1 LOC106565909 coding downstream 264790 66844021 ~ 66853631 (+)
LOC110494429 LOC106565956 coding downstream 287980 66867211 ~ 66867881 (+)
pank4 LOC106565907 coding downstream 343469 66922700 ~ 66941538 (+)
G1477576 NA non-coding upstream 22400 66556260 ~ 66556536 (+)
G1477570 NA non-coding upstream 27210 66551513 ~ 66551726 (+)
G1477510 NA non-coding upstream 56505 66521122 ~ 66522431 (+)
G1477377 NA non-coding upstream 140474 66430920 ~ 66438462 (+)
G1477381 NA non-coding upstream 151380 66427220 ~ 66427556 (+)
G1477598 NA non-coding downstream 3688 66582919 ~ 66583146 (+)
G1477601 NA non-coding downstream 7720 66586951 ~ 66587172 (+)
G1477751 NA non-coding downstream 234690 66813921 ~ 66814333 (+)
G1477758 NA non-coding downstream 244595 66823826 ~ 66824068 (+)
G1477761 NA non-coding downstream 250559 66829790 ~ 66829996 (+)
G1477578 LOC100194703 other upstream 21424 66557037 ~ 66557512 (+)
G1477313 NA other upstream 288488 66288872 ~ 66290448 (+)
G1476898 NA other upstream 795601 65781779 ~ 65783335 (+)
G1476569 NA other upstream 1112169 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1251773 65325877 ~ 65327163 (+)
kcnab2a kcnab2 other downstream 100029 66566779 ~ 66780792 (+)
G1477697 NA other downstream 138142 66717373 ~ 66718688 (+)
G1478504 NA other downstream 1082756 67661987 ~ 67663649 (+)

Expression


Co-expression Network