G1477601


Basic Information

Item Value
gene id G1477601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66586951 ~ 66587172 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1689909
cgtGTAGATATGTGTAAGTGGGTgctgtttttcttgtttttttttctatgtgctttgtctctgttgttgtatctcttaatatgggtgaaaattgtgaaattccaaTAAAAATACTGTTACAAAAAAAAGGAACCAACAgttttcatgttctgagcaaggaagttaagttagctttcttacatggcacattgcatttttacttctccaacactttctttttgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1689909 True 222 lncRNA 0.33 1 66586951 66587172

Neighbor

gene id symbol gene type direction distance location
park7 park7 coding upstream 20511 66559477 ~ 66566440 (+)
pax7a pax7a coding upstream 59344 66465455 ~ 66527607 (+)
LOC110494417 LOC106565918 coding upstream 185764 66391396 ~ 66401187 (+)
LOC110516128 LOC106565694 coding upstream 936975 65580256 ~ 65649976 (+)
LOC110494410 LOC106565693 coding upstream 1008007 65572367 ~ 65578944 (+)
akr7a3 LOC100194670 coding downstream 198344 66785516 ~ 66790374 (+)
iffo2b LOC106565910 coding downstream 211595 66798767 ~ 66840370 (+)
aldh4a1 LOC106565909 coding downstream 256849 66844021 ~ 66853631 (+)
LOC110494429 LOC106565956 coding downstream 280039 66867211 ~ 66867881 (+)
pank4 LOC106565907 coding downstream 335528 66922700 ~ 66941538 (+)
G1477598 NA non-coding upstream 3805 66582919 ~ 66583146 (+)
G1477594 NA non-coding upstream 7720 66578936 ~ 66579231 (+)
G1477576 NA non-coding upstream 30415 66556260 ~ 66556536 (+)
G1477570 NA non-coding upstream 35225 66551513 ~ 66551726 (+)
G1477510 NA non-coding upstream 64520 66521122 ~ 66522431 (+)
G1477751 NA non-coding downstream 226749 66813921 ~ 66814333 (+)
G1477758 NA non-coding downstream 236654 66823826 ~ 66824068 (+)
G1477761 NA non-coding downstream 242618 66829790 ~ 66829996 (+)
G1477748 NA non-coding downstream 269617 66856789 ~ 66857411 (+)
G1477578 LOC100194703 other upstream 29439 66557037 ~ 66557512 (+)
G1477313 NA other upstream 296503 66288872 ~ 66290448 (+)
G1476898 NA other upstream 803616 65781779 ~ 65783335 (+)
G1476569 NA other upstream 1120184 65418091 ~ 65466767 (+)
G1476520 NA other upstream 1259788 65325877 ~ 65327163 (+)
kcnab2a kcnab2 other downstream 92088 66566779 ~ 66780792 (+)
G1477697 NA other downstream 130201 66717373 ~ 66718688 (+)
G1478504 NA other downstream 1074815 67661987 ~ 67663649 (+)

Expression


Co-expression Network