G1478031


Basic Information

Item Value
gene id G1478031
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 66913913 ~ 66914234 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1690373
tacatcaccagaggaacagaggatgagtaggataagggtacggttAAAGGCTATAAGAATTGGTCATCttgtgcgttcggaacagagtgtaaaaggagcagatttctggcataatatattcaaggcataatatacagacaagggtatggtaggatgtgaatacagtggaggtaaacctaggcattgagtgacgatgagagaggttttgtctctagagggcaccatttaagccaggtgaggtcactgcatgtgttgggggtggaacaaaagggctagctaaagcatattgagcagggctggaggctgtacagtgaaataagac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1690373 True 322 lncRNA 0.45 1 66913913 66914234

Neighbor

gene id symbol gene type direction distance location
LOC110494429 LOC106565956 coding upstream 46032 66867211 ~ 66867881 (+)
aldh4a1 LOC106565909 coding upstream 60282 66844021 ~ 66853631 (+)
iffo2b LOC106565910 coding upstream 75476 66798767 ~ 66840370 (+)
akr7a3 LOC100194670 coding upstream 123539 66785516 ~ 66790374 (+)
kcnab2a kcnab2 coding upstream 226149 66566779 ~ 66780792 (+)
pank4 LOC106565907 coding downstream 8466 66922700 ~ 66941538 (+)
LOC110494434 LOC106565906 coding downstream 27948 66942182 ~ 66954149 (+)
agtrap agtrap coding downstream 46857 66961091 ~ 66967232 (+)
LOC110494437 LOC106582975 coding downstream 115223 67029457 ~ 67035830 (+)
LOC110494438 LOC106565902 coding downstream 123776 67038010 ~ 67086398 (+)
G1478029 NA non-coding upstream 2272 66911306 ~ 66911641 (+)
G1477788 NA non-coding upstream 17896 66895625 ~ 66896017 (+)
G1477784 NA non-coding upstream 25241 66888311 ~ 66888672 (+)
G1477781 NA non-coding upstream 31773 66881787 ~ 66882140 (+)
G1477775 NA non-coding upstream 43012 66870657 ~ 66870901 (+)
G1478035 NA non-coding downstream 5485 66919719 ~ 67018407 (+)
G1478081 NA non-coding downstream 98312 67012546 ~ 67013953 (+)
G1478095 NA non-coding downstream 173059 67087293 ~ 67087472 (+)
G1478094 NA non-coding downstream 175073 67089307 ~ 67090518 (+)
G1477697 NA other upstream 195225 66717373 ~ 66718688 (+)
G1477578 LOC100194703 other upstream 356401 66557037 ~ 66557512 (+)
G1478504 NA other downstream 747753 67661987 ~ 67663649 (+)
G1479621 NA other downstream 1208304 68122538 ~ 68125780 (+)
G1480254 pad other downstream 2020092 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 3736709 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 3925386 70809971 ~ 70847390 (+)

Expression


Co-expression Network