G1478095


Basic Information

Item Value
gene id G1478095
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 67087293 ~ 67087472 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1690448
ctttcttctgaaactcgtcagtctattcttgctctgagaaattaaggctattccatgcaagaatttgtcaagaaactgaagatctcgtataacgctgtactactcccttcacagaacagcaaaaaaactGTATCTAACCAGAAAAGaaataggagtgggaggccccggtgcacaactgaa

Function

NR:

description
hypothetical protein EH28_22137

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1690448 True 180 lncRNA 0.41 1 67087293 67087472

Neighbor

gene id symbol gene type direction distance location
LOC110494438 LOC106565902 coding upstream 895 67038010 ~ 67086398 (+)
LOC110494437 LOC106582975 coding upstream 51463 67029457 ~ 67035830 (+)
agtrap agtrap coding upstream 120102 66961091 ~ 66967232 (+)
LOC110494434 LOC106565906 coding upstream 133144 66942182 ~ 66954149 (+)
pank4 LOC106565907 coding upstream 145755 66922700 ~ 66941538 (+)
arhgef10la LOC106565901 coding downstream 4043 67091515 ~ 67248760 (+)
LOC110494440 LOC106565900 coding downstream 380944 67468416 ~ 67743756 (+)
LOC118940488 NA coding downstream 610368 67697840 ~ 67698871 (+)
klhdc7a LOC106565897 coding downstream 660349 67747821 ~ 67752755 (+)
dhrs3b dhrs3 coding downstream 687902 67775374 ~ 67784857 (+)
G1478035 NA non-coding upstream 68886 66919719 ~ 67018407 (+)
G1478081 NA non-coding upstream 73340 67012546 ~ 67013953 (+)
G1478031 NA non-coding upstream 173059 66913913 ~ 66914234 (+)
G1478029 NA non-coding upstream 175652 66911306 ~ 66911641 (+)
G1478094 NA non-coding downstream 1835 67089307 ~ 67090518 (+)
G1478323 NA non-coding downstream 329241 67416713 ~ 67422808 (+)
G1478405 NA non-coding downstream 446647 67534119 ~ 67534397 (+)
LOC110494429 LOC106565956 other upstream 219413 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 252353 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 306501 66566779 ~ 66780792 (+)
G1477697 NA other upstream 368605 66717373 ~ 66718688 (+)
G1477578 LOC100194703 other upstream 529781 66557037 ~ 66557512 (+)
G1478504 NA other downstream 574515 67661987 ~ 67663649 (+)
G1479621 NA other downstream 1035066 68122538 ~ 68125780 (+)
G1480254 pad other downstream 1846854 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 3563471 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 3752148 70809971 ~ 70847390 (+)

Expression


Co-expression Network