G1478504


Basic Information

Item Value
gene id G1478504
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 67661987 ~ 67663649 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1690884
GtaatttggaggtgtacctgtggatgtatttcaaggcgtaCATtaaaactcagtgcatctttccttgacatcatggaaaaatgaaaagaaatcagccaagacctcagaaaagaaattgtagacctcgacaagtctggttcatccttgggagcaatttccaatcatctgaaggtaccacattcatctgtataaacaatagtatgcaagtataaacactatgggacaacgcagctgtcataccgctcaggaaggagacgcgttctgtctcctagagatgaacatactttggtgcgaaaagtgcaaatcaatcccagaacaacagcaaatgaccttgtgaagaatctggaggaaacaggtacaaaagtatctatatccacagtaaaacatgtcctatattgacatatcgtgaaaggccgctcagcaatgaagaagccactgctccaataccgccataaaaaagccagactacggtttgcaactgcacatggggacaaaattTGTagatggtctgatgaaacaaaatttgaactgtttggccatcgttatgtttggaggaaaaagggggaggcttgcaagctgaagaacaccatcacaaacgtgagcatgatggtggcagcatcatgttgtgggggtgctttgctgcaggagggactggtgcacttcacaaaatagatggcatcatgaggcaggacaattacgtggatatattgaagcaacatctcaagacatcagtcaggaagttaaacctttgttgcaaatgggtcttccaaatggacaatgacctaaagcatacttccaaagttgtggcaaaatggcttaaggacaacaaagtcgcctcccgggtggcgcagtggttaagctgtgccatcagagactctgggttcgcgcccaggctctgtcgtaaccgaccacgaccgggaggtccatggggcgacgcacaattggcctagcgtcgtccgggttagggagggcttggtcggtagggatgtccttgtctcatcgcgcaccagcgactcctgtggcgggccgggcgctaaccaaggttaccaggtgcactgtgtttcctccgacacattggtgcggctggcttccgggttggatgcgcgctgtgttaagaagcagtgcggctaggttgggttgtgtatcggaggacgcatgactttcaacctttgtctctcccgagcccgtacgggagttgtagcgatgagacaagatagaagctactacaacaattggataccacgaaattggggagaaaaaggggtaaaaaaaacaacaaaaaaaaaataaaaaggacaacaaagtcaagatctTGGAGTTACCATCACAAACCCTGACCTCGACCCTATAaaaaatgtatgggcagaactgaaaaaagtgtgcgagcctacaaacctgactcagttaaaccaggagaaatgggccaaaattcacccaatttattgtgggaagcttgtggaaggctacccaaaacgtttgaccaaagtttaACCATttaaggtaatgctaccaaatgctaattgagtgtatgtagacttcagacccactgggaaggtgatgaaagaaaaaaaagctgaaataaagcattctctcaactattattctgacatttaacattcttaaaataatggcCTAAAACata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1690884 True 1642 TUCP 0.45 2 67661987 67663649

Neighbor

gene id symbol gene type direction distance location
arhgef10la LOC106565901 coding upstream 462364 67091515 ~ 67248760 (+)
LOC110494438 LOC106565902 coding upstream 575589 67038010 ~ 67086398 (+)
LOC110494437 LOC106582975 coding upstream 626157 67029457 ~ 67035830 (+)
agtrap agtrap coding upstream 694796 66961091 ~ 66967232 (+)
LOC110494434 LOC106565906 coding upstream 707838 66942182 ~ 66954149 (+)
LOC118940488 NA coding downstream 34191 67697840 ~ 67698871 (+)
klhdc7a LOC106565897 coding downstream 84172 67747821 ~ 67752755 (+)
dhrs3b dhrs3 coding downstream 111725 67775374 ~ 67784857 (+)
LOC110493241 LOC106565891 coding downstream 426556 68090205 ~ 68094863 (+)
si:ch211-220m17.5 LOC106565952 coding downstream 486381 68150030 ~ 68151429 (+)
G1478405 NA non-coding upstream 127590 67534119 ~ 67534397 (+)
G1478323 NA non-coding upstream 239179 67416713 ~ 67422808 (+)
G1478094 NA non-coding upstream 571469 67089307 ~ 67090518 (+)
G1478095 NA non-coding upstream 574515 67087293 ~ 67087472 (+)
G1478356 LOC106565899 non-coding downstream 89707 67753356 ~ 67754494 (+)
G1478558 NA non-coding downstream 92474 67756123 ~ 67756335 (+)
G1478563 NA non-coding downstream 98145 67761794 ~ 67762001 (+)
G1479310 NA non-coding downstream 210512 67874161 ~ 67874581 (+)
LOC110494429 LOC106565956 other upstream 794107 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 827047 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 881195 66566779 ~ 66780792 (+)
G1477697 NA other upstream 943299 66717373 ~ 66718688 (+)
G1477578 LOC100194703 other upstream 1104475 66557037 ~ 66557512 (+)
G1479621 NA other downstream 458889 68122538 ~ 68125780 (+)
G1480254 pad other downstream 1270677 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2987294 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 3175971 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 3514864 71178513 ~ 71180429 (+)

Expression


Co-expression Network