G1479316


Basic Information

Item Value
gene id G1479316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 67876825 ~ 67877084 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1691763
ATTTAATATTAacaaagttgagaaataaatataggaGGCCTATCCTTTAGAatgctgatgggatcctcctctttttaacaTGGGCTTATAGGAACACATTACATTCCATGCATCAACCAGCTATGAGGAGCTGGCTCTCGCTGAGCTACAGGTGATCCTAATGTGCTCAAACTGTGAATGGCAGGACTCTCACGAAgtgcttgatttgattttcgattgcatttgctttgatgtcagagtggttagtgGGACAATAGAAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1691763 True 260 lncRNA 0.41 1 67876825 67877084

Neighbor

gene id symbol gene type direction distance location
dhrs3b dhrs3 coding upstream 91968 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 124070 67747821 ~ 67752755 (+)
LOC110494440 LOC106565900 coding upstream 133069 67468416 ~ 67743756 (+)
LOC118940488 NA coding upstream 177954 67697840 ~ 67698871 (+)
arhgef10la LOC106565901 coding upstream 677202 67091515 ~ 67248760 (+)
LOC110493241 LOC106565891 coding downstream 213121 68090205 ~ 68094863 (+)
si:ch211-220m17.5 LOC106565952 coding downstream 272946 68150030 ~ 68151429 (+)
LOC110494448 LOC106565889 coding downstream 399838 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 441572 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 445103 68322187 ~ 68395828 (+)
G1479311 NA non-coding upstream 1608 67874998 ~ 67875217 (+)
G1479310 NA non-coding upstream 2244 67874161 ~ 67874581 (+)
G1478563 NA non-coding upstream 114824 67761794 ~ 67762001 (+)
G1478558 NA non-coding upstream 120490 67756123 ~ 67756335 (+)
G1478356 LOC106565899 non-coding upstream 122331 67753356 ~ 67754494 (+)
G1479344 NA non-coding downstream 37365 67914449 ~ 67914750 (+)
G1479345 NA non-coding downstream 40816 67917900 ~ 67918102 (+)
G1479347 NA non-coding downstream 42675 67919759 ~ 67920004 (+)
G1479350 NA non-coding downstream 44062 67921146 ~ 67921397 (+)
G1479357 NA non-coding downstream 55256 67932340 ~ 67932545 (+)
G1478504 NA other upstream 213176 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1008945 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1041885 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 1096033 66566779 ~ 66780792 (+)
G1479621 NA other downstream 245454 68122538 ~ 68125780 (+)
G1480254 pad other downstream 1057242 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2773859 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2962536 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 3301429 71178513 ~ 71180429 (+)

Expression


Co-expression Network