G1479344


Basic Information

Item Value
gene id G1479344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 67914449 ~ 67914750 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1691792
ctgccagtgactggaaagaattgcaaaaatcgctgaagctggagacttatatttccctcactaactttaaacatcagctatctgagcagctaaccgattgctgcagctgtacatagtctatctgtaaatagcccacccaacctacctacctcatccccatattgtttttatttacttttctgctcttttgcacaccagtatctctacttgcacatctgctcatctattactccagtattcatctgctaaattgtaattactttgctactatggcctatttattgccttatctcctcattcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1691792 True 302 lncRNA 0.40 1 67914449 67914750

Neighbor

gene id symbol gene type direction distance location
dhrs3b dhrs3 coding upstream 129592 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 161694 67747821 ~ 67752755 (+)
LOC110494440 LOC106565900 coding upstream 170693 67468416 ~ 67743756 (+)
LOC118940488 NA coding upstream 215578 67697840 ~ 67698871 (+)
arhgef10la LOC106565901 coding upstream 714826 67091515 ~ 67248760 (+)
LOC110493241 LOC106565891 coding downstream 175455 68090205 ~ 68094863 (+)
si:ch211-220m17.5 LOC106565952 coding downstream 235280 68150030 ~ 68151429 (+)
LOC110494448 LOC106565889 coding downstream 362172 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 403906 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 407437 68322187 ~ 68395828 (+)
G1479316 NA non-coding upstream 37365 67876825 ~ 67877084 (+)
G1479311 NA non-coding upstream 39232 67874998 ~ 67875217 (+)
G1479310 NA non-coding upstream 39868 67874161 ~ 67874581 (+)
G1478563 NA non-coding upstream 152448 67761794 ~ 67762001 (+)
G1478558 NA non-coding upstream 158114 67756123 ~ 67756335 (+)
G1479345 NA non-coding downstream 3150 67917900 ~ 67918102 (+)
G1479347 NA non-coding downstream 5009 67919759 ~ 67920004 (+)
G1479350 NA non-coding downstream 6396 67921146 ~ 67921397 (+)
G1479357 NA non-coding downstream 17590 67932340 ~ 67932545 (+)
G1479449 NA non-coding downstream 157820 68072570 ~ 68072962 (+)
G1478504 NA other upstream 250800 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1046569 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1079509 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 1133657 66566779 ~ 66780792 (+)
G1479621 NA other downstream 207788 68122538 ~ 68125780 (+)
G1480254 pad other downstream 1019576 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2736193 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2924870 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 3263763 71178513 ~ 71180429 (+)

Expression


Co-expression Network