G1479449


Basic Information

Item Value
gene id G1479449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68072570 ~ 68072962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1691900
ggggataaagaatatgtacataaggatttatgaatgagtgatggtacagagcagcataggcaagatacagtagatggtatcgggtacagtatgtacaaatgagatgagtatgtaaacaaagtggcatagtatagtataaagtggctagtgatacatgtattacataaggataccgtcgatgatatagagtacagtatatacgtatgcatatgagatgaataatgtagggtaagtaacatttatataaggtagcattgtttaaagtggctagtgatatatttacatcatttcccatcaattcccattattaaagtggctggagttgagtcagtgtcagtgtgttggcagcagccactcagtgttctcctggctagtagctagttagtTTTACAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1691900 True 393 lncRNA 0.37 1 68072570 68072962

Neighbor

gene id symbol gene type direction distance location
dhrs3b dhrs3 coding upstream 287713 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 319815 67747821 ~ 67752755 (+)
LOC110494440 LOC106565900 coding upstream 328814 67468416 ~ 67743756 (+)
LOC118940488 NA coding upstream 373699 67697840 ~ 67698871 (+)
arhgef10la LOC106565901 coding upstream 872947 67091515 ~ 67248760 (+)
LOC110493241 LOC106565891 coding downstream 17243 68090205 ~ 68094863 (+)
si:ch211-220m17.5 LOC106565952 coding downstream 77068 68150030 ~ 68151429 (+)
LOC110494448 LOC106565889 coding downstream 203960 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 245694 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 249225 68322187 ~ 68395828 (+)
G1479357 NA non-coding upstream 140025 67932340 ~ 67932545 (+)
G1479350 NA non-coding upstream 151173 67921146 ~ 67921397 (+)
G1479347 NA non-coding upstream 152566 67919759 ~ 67920004 (+)
G1479345 NA non-coding upstream 154468 67917900 ~ 67918102 (+)
G1479344 NA non-coding upstream 157820 67914449 ~ 67914750 (+)
G1479455 NA non-coding downstream 16653 68089615 ~ 68089922 (+)
G1479442 NA non-coding downstream 22367 68095329 ~ 68098028 (+)
G1479460 NA non-coding downstream 32973 68105935 ~ 68106186 (+)
G1479615 NA non-coding downstream 40449 68113411 ~ 68113705 (+)
G1479617 NA non-coding downstream 42106 68115068 ~ 68115292 (+)
G1478504 NA other upstream 408921 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1204690 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1237630 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 1291778 66566779 ~ 66780792 (+)
G1479621 NA other downstream 49576 68122538 ~ 68125780 (+)
G1480254 pad other downstream 861364 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2577981 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2766658 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 3105551 71178513 ~ 71180429 (+)

Expression


Co-expression Network