G1479657


Basic Information

Item Value
gene id G1479657
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68181808 ~ 68182080 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1692115
agtagtcctgaggcatggtcctagggctcaggtcctccgagagagaaagaaagagagaaagagagaattagagagagcatacttaaattcacacaggacaccggataagacaggaaaagtactccagatataacaaactgaccctagccccccaacacataaattactacagcataaatactggaggctaagacaggaggggtcaggagactctgtggccccatccaatgatacccccggacagggccaaacaggaaggatataaccccacgc

Function

NR:

description
ZK1236.4, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1692115 True 273 lncRNA 0.49 1 68181808 68182080

Neighbor

gene id symbol gene type direction distance location
si:ch211-220m17.5 LOC106565952 coding upstream 30379 68150030 ~ 68151429 (+)
LOC110493241 LOC106565891 coding upstream 86945 68090205 ~ 68094863 (+)
dhrs3b dhrs3 coding upstream 396951 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 429053 67747821 ~ 67752755 (+)
LOC110494440 LOC106565900 coding upstream 438052 67468416 ~ 67743756 (+)
LOC110494448 LOC106565889 coding downstream 94842 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 136576 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 140107 68322187 ~ 68395828 (+)
LOC110494452 LOC106565886 coding downstream 219659 68401739 ~ 68408133 (+)
LOC110494453 LOC106565884 coding downstream 226857 68408937 ~ 68414206 (+)
G1479617 NA non-coding upstream 66516 68115068 ~ 68115292 (+)
G1479615 NA non-coding upstream 68103 68113411 ~ 68113705 (+)
G1479460 NA non-coding upstream 75622 68105935 ~ 68106186 (+)
G1479442 NA non-coding upstream 83780 68095329 ~ 68098028 (+)
G1479455 NA non-coding upstream 91886 68089615 ~ 68089922 (+)
G1479659 NA non-coding downstream 4098 68186178 ~ 68187003 (+)
G1479662 NA non-coding downstream 16058 68198138 ~ 68198730 (+)
G1479666 NA non-coding downstream 38317 68220397 ~ 68220725 (+)
G1479667 NA non-coding downstream 38928 68221008 ~ 68221318 (+)
G1479668 NA non-coding downstream 39967 68222047 ~ 68222316 (+)
G1479621 NA other upstream 56028 68122538 ~ 68125780 (+)
G1478504 NA other upstream 518159 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1313928 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1346868 66798767 ~ 66840370 (+)
kcnab2a kcnab2 other upstream 1401016 66566779 ~ 66780792 (+)
G1480254 pad other downstream 752246 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2468863 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2657540 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2996433 71178513 ~ 71180429 (+)
G1483638 NA other downstream 3199864 71381944 ~ 71382272 (+)

Expression


Co-expression Network