G1479662


Basic Information

Item Value
gene id G1479662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68198138 ~ 68198730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1692120
gttcctccttggggcggcgatattctccaggctgagcccagggtcctttaccgtccagttcttcctcccatgtccatttctccaggtggtgcagcctctcccactgcagctgctcctgcttctcctgctgcacctttgggcggctacactcccctggtttagcccagggtcctctcccgtcgaggatttcctcccatgtccagaagtccttattgcgcgtctcctcgcgctgctcctgcctgttgacacgctgcttggtccgttggtggtgggtgattctgtaacggttttctttatgagaaggagagtcggaccaaaatgcagcgtgtagattgcgatccatgttttaatgaacaaacgttaaacacgaatcagtacaaaaacaataaacgtaacgaaaacctaaacagcctatctggtgaaaacacatagacaggaacaatcacccacacccacacagtgaaacccaggctacctaaatatggttcccaatcagagacaatgacgaacacctgcctctgattgagaaccatatcaggccgaacatagaactagacaaactagacatgtaacatagaatgcccactcagatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1692120 True 593 lncRNA 0.50 1 68198138 68198730

Neighbor

gene id symbol gene type direction distance location
si:ch211-220m17.5 LOC106565952 coding upstream 46709 68150030 ~ 68151429 (+)
LOC110493241 LOC106565891 coding upstream 103275 68090205 ~ 68094863 (+)
dhrs3b dhrs3 coding upstream 413281 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 445383 67747821 ~ 67752755 (+)
LOC118940488 NA coding upstream 499267 67697840 ~ 67698871 (+)
LOC110494448 LOC106565889 coding downstream 78192 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 119926 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 123457 68322187 ~ 68395828 (+)
LOC110494452 LOC106565886 coding downstream 203009 68401739 ~ 68408133 (+)
LOC110494453 LOC106565884 coding downstream 210207 68408937 ~ 68414206 (+)
G1479659 NA non-coding upstream 11135 68186178 ~ 68187003 (+)
G1479657 NA non-coding upstream 16058 68181808 ~ 68182080 (+)
G1479617 NA non-coding upstream 82846 68115068 ~ 68115292 (+)
G1479615 NA non-coding upstream 84433 68113411 ~ 68113705 (+)
G1479460 NA non-coding upstream 91952 68105935 ~ 68106186 (+)
G1479666 NA non-coding downstream 21667 68220397 ~ 68220725 (+)
G1479667 NA non-coding downstream 22278 68221008 ~ 68221318 (+)
G1479668 NA non-coding downstream 23317 68222047 ~ 68222316 (+)
G1479670 NA non-coding downstream 25284 68224014 ~ 68225516 (+)
G1479675 NA non-coding downstream 47193 68245923 ~ 68246147 (+)
G1479621 NA other upstream 72358 68122538 ~ 68125780 (+)
G1478504 NA other upstream 534489 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1330258 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1363198 66798767 ~ 66840370 (+)
G1477697 NA other upstream 1479450 66717373 ~ 66718688 (+)
G1480254 pad other downstream 735596 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2452213 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2640890 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2979783 71178513 ~ 71180429 (+)
G1483638 NA other downstream 3183214 71381944 ~ 71382272 (+)

Expression


Co-expression Network