G1479675


Basic Information

Item Value
gene id G1479675
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68245923 ~ 68246147 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1692138
gcctctgattgggaaccatgccaggccaacatagaaataaacaccctagattacccaccctagtcacaccccgacctaaccaaaatagagaattaaaaggatctctatagtcagggcgtgacagtgtaactctgtgttgtttgtatcgcactgctttgctttatcttggccaggttgcagttgtaaatgagagcaagttctcaacttgttctcaactggttaaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1692138 True 225 lncRNA 0.44 1 68245923 68246147

Neighbor

gene id symbol gene type direction distance location
si:ch211-220m17.5 LOC106565952 coding upstream 94494 68150030 ~ 68151429 (+)
LOC110493241 LOC106565891 coding upstream 151060 68090205 ~ 68094863 (+)
dhrs3b dhrs3 coding upstream 461066 67775374 ~ 67784857 (+)
klhdc7a LOC106565897 coding upstream 493168 67747821 ~ 67752755 (+)
LOC118940488 NA coding upstream 547052 67697840 ~ 67698871 (+)
LOC110494448 LOC106565889 coding downstream 30775 68276922 ~ 68320684 (+)
LOC118940544 NA coding downstream 72509 68318656 ~ 68318809 (+)
LOC110494450 NA coding downstream 76040 68322187 ~ 68395828 (+)
LOC110494452 LOC106565886 coding downstream 155592 68401739 ~ 68408133 (+)
LOC110494453 LOC106565884 coding downstream 162790 68408937 ~ 68414206 (+)
G1479670 NA non-coding upstream 20407 68224014 ~ 68225516 (+)
G1479668 NA non-coding upstream 23607 68222047 ~ 68222316 (+)
G1479667 NA non-coding upstream 24605 68221008 ~ 68221318 (+)
G1479666 NA non-coding upstream 25198 68220397 ~ 68220725 (+)
G1479662 NA non-coding upstream 47193 68198138 ~ 68198730 (+)
G1479679 LOC100286407 non-coding downstream 12779 68258926 ~ 68259987 (+)
G1479684 LOC100286407 non-coding downstream 17818 68263965 ~ 68265378 (+)
G1479722 NA non-coding downstream 162139 68408286 ~ 68408545 (+)
G1479725 NA non-coding downstream 179336 68425483 ~ 68425951 (+)
G1479757 NA non-coding downstream 223643 68469790 ~ 68470847 (+)
G1479621 NA other upstream 120143 68122538 ~ 68125780 (+)
G1478504 NA other upstream 582274 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1378043 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1410983 66798767 ~ 66840370 (+)
G1477697 NA other upstream 1527235 66717373 ~ 66718688 (+)
G1480254 pad other downstream 688179 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2404796 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2593473 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2932366 71178513 ~ 71180429 (+)
G1483638 NA other downstream 3135797 71381944 ~ 71382272 (+)

Expression


Co-expression Network