G1479722



Basic Information


Item Value
gene id G1479722
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68408286 ~ 68408545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1692263
AAAGTGCTGGATGTTTTAGTTGTGGGTTATTGAAATAGATATACCTAATTTTGCAATGTCACTTTGCAAATTAGGCCATATCCATATATCCAGACCGCTTATGAATCATTTTGGTGAATGAAGATATTCAAAACATTGTTTACTTATCATGCAAATTGAAACATGTTGATGAACCAGGAGGAAATGAGATGAGAATAACAATTCAGGAACAATGGGCTACCGCAGGGATACAACCTAGCCGACTATACGCAACTCCATGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1692263 True 260 lncRNA 0.37 1 68408286 68408545

Neighbor


gene id symbol gene type direction distance location
LOC110494452 LOC106565886 coding upstream 153 68401739 ~ 68408133 (+)
LOC110494450 NA coding upstream 12458 68322187 ~ 68395828 (+)
LOC110494448 LOC106565889 coding upstream 87602 68276922 ~ 68320684 (+)
LOC118940544 NA coding upstream 89477 68318656 ~ 68318809 (+)
si:ch211-220m17.5 LOC106565952 coding upstream 256857 68150030 ~ 68151429 (+)
LOC110494453 LOC106565884 coding downstream 392 68408937 ~ 68414206 (+)
LOC110494454 LOC106561952 coding downstream 7449 68415994 ~ 68418282 (+)
LOC110493242 kif17 coding downstream 10172 68418717 ~ 68419924 (+)
LOC110494460 LOC106565879 coding downstream 76241 68484786 ~ 68487734 (+)
LOC110494461 LOC106565878 coding downstream 118316 68526861 ~ 68593618 (+)
G1479684 LOC100286407 non-coding upstream 142908 68263965 ~ 68265378 (+)
G1479679 LOC100286407 non-coding upstream 148299 68258926 ~ 68259987 (+)
G1479675 NA non-coding upstream 162139 68245923 ~ 68246147 (+)
G1479670 NA non-coding upstream 182770 68224014 ~ 68225516 (+)
G1479668 NA non-coding upstream 185970 68222047 ~ 68222316 (+)
G1479725 NA non-coding downstream 16938 68425483 ~ 68425951 (+)
G1479757 NA non-coding downstream 61245 68469790 ~ 68470847 (+)
G1479766 NA non-coding downstream 71066 68479611 ~ 68479914 (+)
G1479778 NA non-coding downstream 87287 68495832 ~ 68496046 (+)
G1480102 NA non-coding downstream 188590 68597135 ~ 68597359 (+)
G1479621 NA other upstream 282506 68122538 ~ 68125780 (+)
G1478504 NA other upstream 744637 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1540406 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1573346 66798767 ~ 66840370 (+)
G1477697 NA other upstream 1689598 66717373 ~ 66718688 (+)
G1480254 pad other downstream 525781 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2242398 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2431075 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2769968 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2973399 71381944 ~ 71382272 (+)

Expression



Co-expression Network