G1479757



Basic Information


Item Value
gene id G1479757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68469790 ~ 68470847 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1692305
gccaggggcacacttcaacattcagacataatttacaaacgaatcATGTATGTTTAGTAAGTCTGTAgttctttaaagtattttttacttaatatACACAGTTATGTAATGTACTTATGTAGGCAGTGGAAGTGAGAAAATTATGTGCACTGACCAGACAGCAGAAATAAAACGTAACCTAATTTATAGCCTATTAACATTTGTTTTTATCAAACTACACTATCTGTGAATAGTTGCTTAGCAGAACATAATGGTCTTCAGTATTAAGGTCATTATGGCGGTCCAAATGTTACAATCTATGTGTACTATTATGTCAGTAATGAAATGAAATAATGACAAACCCCAAATAAATAAAGCCCCAATAAAAGCTACAGCACGTTGCCCTTAAAATATCACAAAATTGGTTTAGAGTAGAGTTAAATATTTCCTATAAAACAAAGCAATTAATCAATTTAGTTCAGTAACCAATTTTGAAGATCTGTATTAACATTTTTCATCTTAAAAGTATTTTACGCTGTCTAACAGCCGACCGAGTACATGTCAAACGACGCTGGAATGTCAAATTCTTTCATAACAGTTTGTTCATTCTTGTTTCCTATTCCATCCTTTCTCCACGTCTTGAAATGGTTCACATTCAAATGGTCAACATATTTCTCAGTGTTCAGAAGGCACCCATTGGCTACTGTTTCTCAGAGTAAGAACCAGGAAGTGGCCAGGTCCAGGTCTTGGCACTGGAACTGGAACTGCTACAGCAGATCAGTTCAGGCTACAATGATTCCGTAGCCAGGGATGTGTGTATCATTGATTGTAAAGAGCTCATGCTTGTGTATGACCACAATGGTATTGTGTAATTTAAAGTTCAATGTTTCTGGGAAGGCACAGAGATGCATAGGCGATCACTCAGTAGGTTTGCACACTTTGCACAGATTGCCAGCTGTGGATGGTAGGAGTTGGCAGAGTCTCCAGTATCCAACAGTTAGTGGTTTAGCAAGTTCACATTAAGGCTTAATCTTCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1692305 True 1015 lncRNA 0.37 2 68469790 68470847

Neighbor


gene id symbol gene type direction distance location
LOC110493242 kif17 coding upstream 49866 68418717 ~ 68419924 (+)
LOC110494454 LOC106561952 coding upstream 51508 68415994 ~ 68418282 (+)
LOC110494453 LOC106565884 coding upstream 55584 68408937 ~ 68414206 (+)
LOC110494452 LOC106565886 coding upstream 61657 68401739 ~ 68408133 (+)
LOC110494450 NA coding upstream 73962 68322187 ~ 68395828 (+)
LOC110494460 LOC106565879 coding downstream 13939 68484786 ~ 68487734 (+)
LOC110494461 LOC106565878 coding downstream 56014 68526861 ~ 68593618 (+)
LOC101268937 LOC106565877 coding downstream 131083 68601930 ~ 68625052 (+)
LOC110494465 NA coding downstream 198285 68669132 ~ 68671682 (+)
LOC110494470 LOC100380857 coding downstream 457117 68927964 ~ 68950793 (+)
G1479725 NA non-coding upstream 43839 68425483 ~ 68425951 (+)
G1479722 NA non-coding upstream 61245 68408286 ~ 68408545 (+)
G1479684 LOC100286407 non-coding upstream 204412 68263965 ~ 68265378 (+)
G1479679 LOC100286407 non-coding upstream 209803 68258926 ~ 68259987 (+)
G1479675 NA non-coding upstream 223643 68245923 ~ 68246147 (+)
G1479766 NA non-coding downstream 8764 68479611 ~ 68479914 (+)
G1479778 NA non-coding downstream 24985 68495832 ~ 68496046 (+)
G1480102 NA non-coding downstream 126288 68597135 ~ 68597359 (+)
G1480103 NA non-coding downstream 127131 68597978 ~ 68598288 (+)
G1480120 NA non-coding downstream 160961 68631808 ~ 68660462 (+)
G1479621 NA other upstream 344010 68122538 ~ 68125780 (+)
G1478504 NA other upstream 806141 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 1601910 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 1634850 66798767 ~ 66840370 (+)
G1477697 NA other upstream 1751102 66717373 ~ 66718688 (+)
G1480254 pad other downstream 463479 68934326 ~ 68999183 (+)
nampt2 LOC106565851 other downstream 2180096 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 2368773 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2707666 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2911097 71381944 ~ 71382272 (+)

Expression



Co-expression Network