Gene
RNA
| Item | Value |
|---|---|
| gene id | G1480120 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 68631808 ~ 68660462 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1692702 | True | 707 | lncRNA | 0.39 | 4 | 68631808 | 68660462 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC101268937 | LOC106565877 | coding | upstream | 6756 | 68601930 ~ 68625052 (+) |
| LOC110494461 | LOC106565878 | coding | upstream | 38190 | 68526861 ~ 68593618 (+) |
| LOC110494460 | LOC106565879 | coding | upstream | 144074 | 68484786 ~ 68487734 (+) |
| LOC110493242 | kif17 | coding | upstream | 211884 | 68418717 ~ 68419924 (+) |
| LOC110494454 | LOC106561952 | coding | upstream | 213526 | 68415994 ~ 68418282 (+) |
| LOC110494465 | NA | coding | downstream | 8670 | 68669132 ~ 68671682 (+) |
| LOC110494470 | LOC100380857 | coding | downstream | 267502 | 68927964 ~ 68950793 (+) |
| LOC110494469 | LOC106565869 | coding | downstream | 317238 | 68977700 ~ 68999543 (+) |
| LOC110494475 | LOC106565865 | coding | downstream | 577244 | 69237706 ~ 69283003 (+) |
| LOC110494476 | LOC106565864 | coding | downstream | 628342 | 69288804 ~ 69296982 (+) |
| G1480103 | NA | non-coding | upstream | 33520 | 68597978 ~ 68598288 (+) |
| G1480102 | NA | non-coding | upstream | 34449 | 68597135 ~ 68597359 (+) |
| G1479778 | NA | non-coding | upstream | 135762 | 68495832 ~ 68496046 (+) |
| G1479766 | NA | non-coding | upstream | 151894 | 68479611 ~ 68479914 (+) |
| G1479757 | NA | non-coding | upstream | 160961 | 68469790 ~ 68470847 (+) |
| G1480123 | NA | non-coding | downstream | 1706 | 68662168 ~ 68664035 (+) |
| G1480126 | NA | non-coding | downstream | 46247 | 68706709 ~ 68708059 (+) |
| G1480112 | NA | non-coding | downstream | 49384 | 68709846 ~ 68710426 (+) |
| G1480144 | NA | non-coding | downstream | 50491 | 68710953 ~ 68712162 (+) |
| G1480152 | NA | non-coding | downstream | 70335 | 68730797 ~ 68731068 (+) |
| G1479621 | NA | other | upstream | 506028 | 68122538 ~ 68125780 (+) |
| G1478504 | NA | other | upstream | 968159 | 67661987 ~ 67663649 (+) |
| LOC110494429 | LOC106565956 | other | upstream | 1763928 | 66867211 ~ 66867881 (+) |
| iffo2b | LOC106565910 | other | upstream | 1796868 | 66798767 ~ 66840370 (+) |
| G1477697 | NA | other | upstream | 1913120 | 66717373 ~ 66718688 (+) |
| G1480254 | pad | other | downstream | 273864 | 68934326 ~ 68999183 (+) |
| nampt2 | LOC106565851 | other | downstream | 1990481 | 70638204 ~ 70656059 (+) |
| LOC110494494 | atxn7 | other | downstream | 2179158 | 70809971 ~ 70847390 (+) |
| G1483346 | LOC106565841 | other | downstream | 2518051 | 71178513 ~ 71180429 (+) |
| G1483638 | NA | other | downstream | 2721482 | 71381944 ~ 71382272 (+) |
