G1480277


Basic Information

Item Value
gene id G1480277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68931226 ~ 68931467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1692876
gtgatcacgctgtccgtagccgatgtgagtaagacctttaaacaggtcaacattcacaaggcagatgggccagatggattaccaggaggtgtgtactccgagcatgcgctgaccaactggcaagtgtctgcactgacatgttcaacctgtccctgaccgagtctgtaataccaacatatttcaagcagaccaccattgtccctttGCCcaggaacactaaggtaacctgcctaaattactac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1692876 True 242 lncRNA 0.49 1 68931226 68931467

Neighbor

gene id symbol gene type direction distance location
LOC110494465 NA coding upstream 259544 68669132 ~ 68671682 (+)
LOC101268937 LOC106565877 coding upstream 306174 68601930 ~ 68625052 (+)
LOC110494461 LOC106565878 coding upstream 337608 68526861 ~ 68593618 (+)
LOC110494460 LOC106565879 coding upstream 443492 68484786 ~ 68487734 (+)
LOC110493242 kif17 coding upstream 511302 68418717 ~ 68419924 (+)
LOC110494469 LOC106565869 coding downstream 46233 68977700 ~ 68999543 (+)
LOC110494475 LOC106565865 coding downstream 306239 69237706 ~ 69283003 (+)
LOC110494476 LOC106565864 coding downstream 357337 69288804 ~ 69296982 (+)
LOC110494479 LOC106565861 coding downstream 417418 69348885 ~ 69354495 (+)
LOC118940683 NA coding downstream 419976 69351443 ~ 69351518 (+)
G1480276 NA non-coding upstream 128 68930836 ~ 68931098 (+)
G1480174 NA non-coding upstream 172540 68758420 ~ 68758686 (+)
G1480170 NA non-coding upstream 175541 68754789 ~ 68755685 (+)
G1480162 NA non-coding upstream 187100 68743549 ~ 68744126 (+)
G1480160 NA non-coding upstream 190417 68740575 ~ 68740809 (+)
G1480254 pad non-coding downstream 2859 68934326 ~ 68999183 (+)
G1480258 NA non-coding downstream 5810 68937277 ~ 68983735 (+)
G1480255 NA non-coding downstream 22982 68954449 ~ 69000797 (+)
G1480732 NA non-coding downstream 200480 69131947 ~ 69132153 (+)
G1480768 NA non-coding downstream 233528 69164995 ~ 69167365 (+)
G1479621 NA other upstream 805446 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1267577 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2063346 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2096286 66798767 ~ 66840370 (+)
G1477697 NA other upstream 2212538 66717373 ~ 66718688 (+)
nampt2 LOC106565851 other downstream 1719476 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 1908153 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2247046 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2450477 71381944 ~ 71382272 (+)

Expression


Co-expression Network