G1480258


Basic Information

Item Value
gene id G1480258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 68937277 ~ 68983735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1692857
CAAAGGAAGATTGCCAAGGCACTTCTAGGAAATTATCTGTCAACTCACACAGGGCACAGCCTTCCACTGATATTAATAGGTACATCAAAATACTGTTCATACTATATTCCTGGAAGTGGGAACATTTTTTGATGGTTGTGTTTTTCAGATGTAAATCTAATCTAACCTCATGGAAACACATTGGGAAAAGCTCATTCGGCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1692857 True 204 lncRNA 0.39 2 68937277 68983735

Neighbor

gene id symbol gene type direction distance location
LOC110494465 NA coding upstream 265595 68669132 ~ 68671682 (+)
LOC101268937 LOC106565877 coding upstream 312225 68601930 ~ 68625052 (+)
LOC110494461 LOC106565878 coding upstream 343659 68526861 ~ 68593618 (+)
LOC110494460 LOC106565879 coding upstream 449543 68484786 ~ 68487734 (+)
LOC110493242 kif17 coding upstream 517353 68418717 ~ 68419924 (+)
LOC110494475 LOC106565865 coding downstream 253971 69237706 ~ 69283003 (+)
LOC110494476 LOC106565864 coding downstream 305069 69288804 ~ 69296982 (+)
LOC110494479 LOC106565861 coding downstream 365150 69348885 ~ 69354495 (+)
LOC118940683 NA coding downstream 367708 69351443 ~ 69351518 (+)
LOC118940682 NA coding downstream 370085 69353820 ~ 69353895 (+)
G1480277 NA non-coding upstream 5810 68931226 ~ 68931467 (+)
G1480276 NA non-coding upstream 6179 68930836 ~ 68931098 (+)
G1480174 NA non-coding upstream 178591 68758420 ~ 68758686 (+)
G1480170 NA non-coding upstream 181592 68754789 ~ 68755685 (+)
G1480162 NA non-coding upstream 193151 68743549 ~ 68744126 (+)
G1480732 NA non-coding downstream 148212 69131947 ~ 69132153 (+)
G1480768 NA non-coding downstream 181260 69164995 ~ 69167365 (+)
G1480846 NA non-coding downstream 325962 69309697 ~ 69309963 (+)
G1480851 NA non-coding downstream 331483 69315218 ~ 69315569 (+)
G1480852 NA non-coding downstream 332562 69316297 ~ 69316738 (+)
G1479621 NA other upstream 811497 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1273628 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2069397 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2102337 66798767 ~ 66840370 (+)
G1477697 NA other upstream 2218589 66717373 ~ 66718688 (+)
nampt2 LOC106565851 other downstream 1667208 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 1855885 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 2194778 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2398209 71381944 ~ 71382272 (+)
G1484782 NA other downstream 3320988 72304723 ~ 72305412 (+)

Expression


Co-expression Network