G1480851


Basic Information

Item Value
gene id G1480851
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69315218 ~ 69315569 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693519
CACTTCCACAGTGCTGAAGACATGGCAGAAGTGGTGGCCACTTTTATTGTCCTTGGTGATGTAGGCGAAGGTACAGAGTTCCTCAGGGTCCTGGGCCGCACAGGAGATGTTCCTGATCTCATGCTCGGCTACTATGGTCTGGTGAGAGGACAGAAGAACAGAATGGAACTGAGGAGCAACAGGAACAACAACATCGACCAGAAACAACAGACTTCATCGGCACCAACAGTGCTATCTTTATTTTAGGGGAATCAGTATGAGAGAGCGAAGTAGGGAAATGATGCTGCTGACATCATCATGCATCTCTCATTGCCTGCAGGCTCCCAGTACCTTAGTGGCTGCGTCGATAAAC

Function

NR:

description
ankyrin repeat and SAM domain-containing protein 1A-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693519 True 352 lncRNA 0.49 1 69315218 69315569

Neighbor

gene id symbol gene type direction distance location
LOC110494476 LOC106565864 coding upstream 18236 69288804 ~ 69296982 (+)
LOC110494475 LOC106565865 coding upstream 32215 69237706 ~ 69283003 (+)
LOC110494469 LOC106565869 coding upstream 315675 68977700 ~ 68999543 (+)
LOC110494470 LOC100380857 coding upstream 364425 68927964 ~ 68950793 (+)
LOC110494465 NA coding upstream 643536 68669132 ~ 68671682 (+)
LOC110494479 LOC106565861 coding downstream 33316 69348885 ~ 69354495 (+)
LOC118940683 NA coding downstream 35874 69351443 ~ 69351518 (+)
LOC118940682 NA coding downstream 38251 69353820 ~ 69353895 (+)
LOC110494481 spcs1 coding downstream 44710 69360279 ~ 69362518 (+)
LOC110494482 LOC106565858 coding downstream 56118 69371687 ~ 69429659 (+)
G1480846 NA non-coding upstream 5255 69309697 ~ 69309963 (+)
G1480768 NA non-coding upstream 147853 69164995 ~ 69167365 (+)
G1480732 NA non-coding upstream 183065 69131947 ~ 69132153 (+)
G1480255 NA non-coding upstream 314421 68954449 ~ 69000797 (+)
G1480258 NA non-coding upstream 331483 68937277 ~ 68983735 (+)
G1480852 NA non-coding downstream 728 69316297 ~ 69316738 (+)
G1480853 NA non-coding downstream 2467 69318036 ~ 69318261 (+)
G1480855 NA non-coding downstream 7221 69322790 ~ 69323026 (+)
G1480859 NA non-coding downstream 11876 69327445 ~ 69327779 (+)
G1480860 NA non-coding downstream 12269 69327838 ~ 69328046 (+)
G1480254 pad other upstream 316035 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1189438 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1651569 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2447338 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2480278 66798767 ~ 66840370 (+)
nampt2 LOC106565851 other downstream 1335374 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 1524051 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1862944 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2066375 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2989154 72304723 ~ 72305412 (+)

Expression


Co-expression Network