G1480852


Basic Information

Item Value
gene id G1480852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69316297 ~ 69316738 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693520
GATCAATATATATTTAATACAAGCATAGAATGACCCAATAATCTGTTAAACACATAACAGCTTTGGTTTCAGATCACCTCAGCAGCAGCTTCCTCTCTTTATGACATGATTATCCCAAGCATACcacagagacacatatttccatcACTTTATGAGCTACAGGTAAAGACAGCGTTTTGGCAGGAGAACTAACATGAGAGCGTGGTCTCTCGCTGTAGGAGCGCAGGGACACACTGCAGTCCTGGTCCATggctctcctcctcctgcctgcCTCTCCCAGGGGCAGGAGCATGTCCATGGAGCGACTGGTGGACGGGTCCATCTGACTCAGAGCAGAGGTCCCTGTCTGGGACAACAAGTCCTGAAACTGACACATACAGATTGATTGATGATGTGGGCGTGGAAGATTTCAAACAAAATAGTAACTCAATACATATTTCAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693520 True 442 lncRNA 0.46 1 69316297 69316738

Neighbor

gene id symbol gene type direction distance location
LOC110494476 LOC106565864 coding upstream 19315 69288804 ~ 69296982 (+)
LOC110494475 LOC106565865 coding upstream 33294 69237706 ~ 69283003 (+)
LOC110494469 LOC106565869 coding upstream 316754 68977700 ~ 68999543 (+)
LOC110494470 LOC100380857 coding upstream 365504 68927964 ~ 68950793 (+)
LOC110494465 NA coding upstream 644615 68669132 ~ 68671682 (+)
LOC110494479 LOC106565861 coding downstream 32147 69348885 ~ 69354495 (+)
LOC118940683 NA coding downstream 34705 69351443 ~ 69351518 (+)
LOC118940682 NA coding downstream 37082 69353820 ~ 69353895 (+)
LOC110494481 spcs1 coding downstream 43541 69360279 ~ 69362518 (+)
LOC110494482 LOC106565858 coding downstream 54949 69371687 ~ 69429659 (+)
G1480851 NA non-coding upstream 728 69315218 ~ 69315569 (+)
G1480846 NA non-coding upstream 6334 69309697 ~ 69309963 (+)
G1480768 NA non-coding upstream 148932 69164995 ~ 69167365 (+)
G1480732 NA non-coding upstream 184144 69131947 ~ 69132153 (+)
G1480255 NA non-coding upstream 315500 68954449 ~ 69000797 (+)
G1480853 NA non-coding downstream 1298 69318036 ~ 69318261 (+)
G1480855 NA non-coding downstream 6052 69322790 ~ 69323026 (+)
G1480859 NA non-coding downstream 10707 69327445 ~ 69327779 (+)
G1480860 NA non-coding downstream 11100 69327838 ~ 69328046 (+)
G1480864 LOC106565863 non-coding downstream 16167 69332905 ~ 69333620 (+)
G1480254 pad other upstream 317114 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1190517 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1652648 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2448417 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2481357 66798767 ~ 66840370 (+)
nampt2 LOC106565851 other downstream 1334205 70638204 ~ 70656059 (+)
LOC110494494 atxn7 other downstream 1522882 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1861775 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2065206 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2987985 72304723 ~ 72305412 (+)

Expression


Co-expression Network