G1480892


Basic Information

Item Value
gene id G1480892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69368239 ~ 69368894 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693568
GTATTTTAGTGCTGTTCTGTTAGCTGTTAACTCACCCTTTTCCCTCTGGTGTTTGGGTCTGGCTGGGGACATTGAGGGGGGCGCTCAGGCCCTGGCTGAGACGAAACCACAGATGCTGCACTATTGGGTCTGCGACTGCCACCAACCGCTTTCTTTCTGGACTTGGCAGTTTTCCTGGAGTGAATCAAACAAACAAGGCATCCAAGATAAGATCAATCCAACACACTTAATTTATTAACTCTTGGTTCAACATACATagacgagagagagagtactAGCCAGGTACTACAACTGATGATGCCACCTACTCTTTGGTGGCCTCTAAAAACATGGTGATTTGTCGTTTGATGTAGGGCTGACGTAGGATGAGTTTGACATCAGGTCTGTCCTCTGGTCTCTTACACAGCATGCCCTTTATCAGAGCGCCCAGCTGAGGGTCATACTTACTCGGCATCTGAGGCAGCTGGAAAGACATAGATCAATGAATCTAGTAGCAGACAAATAATCTGTCATCATGACTAATAATTTGGGCAAGATGTAAGGGACTGACCTTTCCCTCTACAATGCGGTAAACGAGTGAGTTCATGTCCTTGGCATTGAAGGCATGTTTCAGGGTGGACATCTCGTACACACAGCAGCCCAGCGCCCACACGTCA

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693568 True 656 lncRNA 0.47 1 69368239 69368894

Neighbor

gene id symbol gene type direction distance location
LOC110494481 spcs1 coding upstream 5721 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 13744 69348885 ~ 69354495 (+)
LOC118940682 NA coding upstream 14344 69353820 ~ 69353895 (+)
LOC118940683 NA coding upstream 16721 69351443 ~ 69351518 (+)
LOC110494476 LOC106565864 coding upstream 71257 69288804 ~ 69296982 (+)
LOC110494482 LOC106565858 coding downstream 2793 69371687 ~ 69429659 (+)
LOC110494487 ptprg coding downstream 731477 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 1052362 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 1269310 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 1302757 70671651 ~ 70712982 (+)
G1480885 LOC106565859 non-coding upstream 1594 69365572 ~ 69366645 (+)
G1480884 NA non-coding upstream 2707 69364130 ~ 69365532 (+)
G1480883 LOC106583014 non-coding upstream 4246 69363785 ~ 69363993 (+)
G1480872 NA non-coding upstream 26941 69341087 ~ 69341298 (+)
G1480870 NA non-coding upstream 29173 69338758 ~ 69339066 (+)
G1480889 nek4 non-coding downstream 491 69369385 ~ 69369639 (+)
G1480890 NA non-coding downstream 1096 69369990 ~ 69370283 (+)
G1480891 NA non-coding downstream 61369 69430263 ~ 69431020 (+)
G1480888 NA non-coding downstream 62983 69431877 ~ 69434164 (+)
G1480927 NA non-coding downstream 68270 69437164 ~ 69437477 (+)
G1480254 pad other upstream 369056 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1242459 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1704590 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2500359 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2533299 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1470726 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1809619 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2013050 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2935829 72304723 ~ 72305412 (+)

Expression


Co-expression Network