G1480889 (nek4)


Basic Information

Item Value
gene id G1480889
gene name nek4
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69369385 ~ 69369639 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693565
CTGGAGGGCCATAGCTATCTGGACGAACCACTCCACCACCTGCCTTTCAGGTAGGAGTTCCCCCTTCTGTTGCTTGAGTCTATGGTAGAGGTCGCCTCCCTCGCAGAAGCACATGGCGATGTAGAGTTGGCAGTCTTCTCCTTCCCACGACTCCCTGTAAGTCACGATGTTTGGGTGTCGTAGTCGCGAGAGAAGCTGAGCCTCCTGTTCCGCGGCTCGCCGCTCACGTTTCGAGGACGTGGTCAAGTTCAACTT

Function

symbol description
nek4 Predicted to enable ATP binding activity and protein kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human NEK4 (NIMA related kinase 4).

NR:

description
PREDICTED: serine/threonine-protein kinase Nek4-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693565 True 255 lncRNA 0.56 1 69369385 69369639

Neighbor

gene id symbol gene type direction distance location
LOC110494481 spcs1 coding upstream 6867 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 14890 69348885 ~ 69354495 (+)
LOC118940682 NA coding upstream 15490 69353820 ~ 69353895 (+)
LOC118940683 NA coding upstream 17867 69351443 ~ 69351518 (+)
LOC110494476 LOC106565864 coding upstream 72403 69288804 ~ 69296982 (+)
LOC110494482 LOC106565858 coding downstream 2048 69371687 ~ 69429659 (+)
LOC110494487 ptprg coding downstream 730732 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 1051617 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 1268565 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 1302012 70671651 ~ 70712982 (+)
G1480892 NA non-coding upstream 491 69368239 ~ 69368894 (+)
G1480885 LOC106565859 non-coding upstream 2740 69365572 ~ 69366645 (+)
G1480884 NA non-coding upstream 3853 69364130 ~ 69365532 (+)
G1480883 LOC106583014 non-coding upstream 5392 69363785 ~ 69363993 (+)
G1480872 NA non-coding upstream 28087 69341087 ~ 69341298 (+)
G1480890 NA non-coding downstream 351 69369990 ~ 69370283 (+)
G1480891 NA non-coding downstream 60624 69430263 ~ 69431020 (+)
G1480888 NA non-coding downstream 62238 69431877 ~ 69434164 (+)
G1480927 NA non-coding downstream 67525 69437164 ~ 69437477 (+)
G1480928 NA non-coding downstream 67886 69437525 ~ 69437797 (+)
G1480254 pad other upstream 370202 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1243605 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1705736 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2501505 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2534445 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1469981 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1808874 71178513 ~ 71180429 (+)
G1483638 NA other downstream 2012305 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2935084 72304723 ~ 72305412 (+)

Expression


Co-expression Network