G1480928


Basic Information

Item Value
gene id G1480928
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69437525 ~ 69437797 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693604
CAactgtctattatattgacaagatagacAACAGGCCatagagatacagatacagcactcatctttgtatctgtgcaaGTATAGCGTCTGTGTCacgtcctgatctgtttcacctgtcttgtgcttgtctccaccccccaccaggtgtctcccatttgtcTTCATTAtgtcctgtgtatttataccagtgttttctgtttgtctgttgccagttcatcttgtcccGTCCAGTGTTACCAGCGTGTTTTTTCCGTTTTCCAGTCTGTCTAGTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693604 True 273 lncRNA 0.44 1 69437525 69437797

Neighbor

gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 7866 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 75007 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 83030 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 662574 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 983459 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 1200407 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 1233854 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 1289785 70727582 ~ 70738226 (+)
G1480927 NA non-coding upstream 48 69437164 ~ 69437477 (+)
G1480888 NA non-coding upstream 3361 69431877 ~ 69434164 (+)
G1480891 NA non-coding upstream 6505 69430263 ~ 69431020 (+)
G1480890 NA non-coding upstream 67242 69369990 ~ 69370283 (+)
G1480889 nek4 non-coding upstream 67886 69369385 ~ 69369639 (+)
G1481101 NA non-coding downstream 9472 69447269 ~ 69447468 (+)
G1481163 fam107a non-coding downstream 83670 69521467 ~ 69524341 (+)
G1481209 LOC100194703 non-coding downstream 156179 69593976 ~ 69594305 (+)
G1481235 NA non-coding downstream 189709 69627506 ~ 69627710 (+)
G1481263 NA non-coding downstream 222716 69660513 ~ 69660812 (+)
G1480254 pad other upstream 438342 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1311745 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1773876 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2569645 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2602585 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1401823 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1740716 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1944147 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2866926 72304723 ~ 72305412 (+)

Expression


Co-expression Network