G1481101



Basic Information


Item Value
gene id G1481101
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69447269 ~ 69447468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1693790
TAACAGGAACAGGTACAAAATAGGGTGAAGCCCAAAACACAGGCGCAAACAACAACCCAAAACCACTATTACAAATACCGGACAGCAAAAAACAATTTTTCAAGTGCAACGTTAATAacaatggttttgggaaacagttTGGAGATTTAACGATGATCCTACGAAGGTCCTAAAAATGAACATAGCCTTAAGATTTGTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1693790 True 200 lncRNA 0.37 1 69447269 69447468

Neighbor


gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 17610 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 84751 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 92774 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 652903 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 973788 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 1190736 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 1224183 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 1280114 70727582 ~ 70738226 (+)
G1480928 NA non-coding upstream 9472 69437525 ~ 69437797 (+)
G1480927 NA non-coding upstream 9792 69437164 ~ 69437477 (+)
G1480888 NA non-coding upstream 13105 69431877 ~ 69434164 (+)
G1480891 NA non-coding upstream 16249 69430263 ~ 69431020 (+)
G1480890 NA non-coding upstream 76986 69369990 ~ 69370283 (+)
G1481163 fam107a non-coding downstream 73999 69521467 ~ 69524341 (+)
G1481209 LOC100194703 non-coding downstream 146508 69593976 ~ 69594305 (+)
G1481235 NA non-coding downstream 180038 69627506 ~ 69627710 (+)
G1481263 NA non-coding downstream 213045 69660513 ~ 69660812 (+)
G1481266 NA non-coding downstream 224136 69671604 ~ 69671811 (+)
G1480254 pad other upstream 448086 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1321489 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1783620 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2579389 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2612329 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1392152 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1731045 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1934476 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2857255 72304723 ~ 72305412 (+)

Expression



Co-expression Network