G1481209 (LOC100194703)


Basic Information

Item Value
gene id G1481209
gene name LOC100194703
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69593976 ~ 69594305 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693910
cacgcacagtgaggcgaagacttttggaggatggcctggtgtcaagaagagcagcaaagaagccacttctctctctAGGAagaacatcagggacagactgatattctgccaAATGTAAagagattggactgctgaggattggggttaagtcattttctctgatgaatcccctttccgattgtttggggcatccggaaaaaagcttgtccggagaagacaaggtgagcgctaccatcagtcctgtgtcatgccaacagtaaagcatcctgagaccatttatgtgtggggttgcttctcagccaagggagtgggctcactcacaatttttcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693910 True 330 lncRNA 0.48 1 69593976 69594305

Neighbor

gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 164317 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 231458 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 239481 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 506066 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 826951 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 1043899 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 1077346 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 1133277 70727582 ~ 70738226 (+)
G1481163 fam107a non-coding upstream 69635 69521467 ~ 69524341 (+)
G1481101 NA non-coding upstream 146508 69447269 ~ 69447468 (+)
G1480928 NA non-coding upstream 156179 69437525 ~ 69437797 (+)
G1480927 NA non-coding upstream 156499 69437164 ~ 69437477 (+)
G1480888 NA non-coding upstream 159812 69431877 ~ 69434164 (+)
G1481235 NA non-coding downstream 33201 69627506 ~ 69627710 (+)
G1481263 NA non-coding downstream 66208 69660513 ~ 69660812 (+)
G1481266 NA non-coding downstream 77299 69671604 ~ 69671811 (+)
G1481270 NA non-coding downstream 85494 69679799 ~ 69679999 (+)
G1481271 NA non-coding downstream 85943 69680248 ~ 69680452 (+)
G1480254 pad other upstream 594793 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1468196 68122538 ~ 68125780 (+)
G1478504 NA other upstream 1930327 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2726096 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2759036 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1245315 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1584208 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1787639 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2710418 72304723 ~ 72305412 (+)

Expression


Co-expression Network