Gene
RNA
| Item | Value |
|---|---|
| gene id | G1481263 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048581.1 |
| NCBI id | CM023235.2 |
| chromosome length | 95212422 |
| location | 69660513 ~ 69660812 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1693964 | True | 300 | lncRNA | 0.39 | 1 | 69660513 | 69660812 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110494482 | LOC106565858 | coding | upstream | 230854 | 69371687 ~ 69429659 (+) |
| LOC110494481 | spcs1 | coding | upstream | 297995 | 69360279 ~ 69362518 (+) |
| LOC110494479 | LOC106565861 | coding | upstream | 306018 | 69348885 ~ 69354495 (+) |
| LOC110494487 | ptprg | coding | downstream | 439559 | 70100371 ~ 70415005 (+) |
| c17h3orf14 | cssa12h3orf14 | coding | downstream | 760444 | 70421256 ~ 70429407 (+) |
| nampt2 | LOC106565851 | coding | downstream | 977392 | 70638204 ~ 70656059 (+) |
| LOC110494491 | synpr | coding | downstream | 1010839 | 70671651 ~ 70712982 (+) |
| mx2 | mx2 | coding | downstream | 1066770 | 70727582 ~ 70738226 (+) |
| G1481235 | NA | non-coding | upstream | 32803 | 69627506 ~ 69627710 (+) |
| G1481209 | LOC100194703 | non-coding | upstream | 66208 | 69593976 ~ 69594305 (+) |
| G1481163 | fam107a | non-coding | upstream | 136172 | 69521467 ~ 69524341 (+) |
| G1481101 | NA | non-coding | upstream | 213045 | 69447269 ~ 69447468 (+) |
| G1480928 | NA | non-coding | upstream | 222716 | 69437525 ~ 69437797 (+) |
| G1481266 | NA | non-coding | downstream | 10792 | 69671604 ~ 69671811 (+) |
| G1481270 | NA | non-coding | downstream | 18987 | 69679799 ~ 69679999 (+) |
| G1481271 | NA | non-coding | downstream | 19436 | 69680248 ~ 69680452 (+) |
| G1481278 | NA | non-coding | downstream | 27454 | 69688266 ~ 69771848 (+) |
| G1481316 | NA | non-coding | downstream | 77284 | 69738096 ~ 69742749 (+) |
| G1480254 | pad | other | upstream | 661330 | 68934326 ~ 68999183 (+) |
| G1479621 | NA | other | upstream | 1534733 | 68122538 ~ 68125780 (+) |
| G1478504 | NA | other | upstream | 1996864 | 67661987 ~ 67663649 (+) |
| LOC110494429 | LOC106565956 | other | upstream | 2792633 | 66867211 ~ 66867881 (+) |
| iffo2b | LOC106565910 | other | upstream | 2825573 | 66798767 ~ 66840370 (+) |
| LOC110494494 | atxn7 | other | downstream | 1178808 | 70809971 ~ 70847390 (+) |
| G1483346 | LOC106565841 | other | downstream | 1517701 | 71178513 ~ 71180429 (+) |
| G1483638 | NA | other | downstream | 1721132 | 71381944 ~ 71382272 (+) |
| G1484782 | NA | other | downstream | 2643911 | 72304723 ~ 72305412 (+) |
