G1481271


Basic Information

Item Value
gene id G1481271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69680248 ~ 69680452 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693972
gactcggttgggcaacacggccttccatctaccaccaacctaccgaagcgcagctcagagtaaatatttattgcattttccttttccaaatgggcggtaatttagaatgcataagatactgtatttacgatagcacagcttcaccctttgttcctcagtcttcccgctctttcactcaaagccagacccttttcttttacggaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693972 True 205 lncRNA 0.45 1 69680248 69680452

Neighbor

gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 250589 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 317730 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 325753 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 419919 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 740804 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 957752 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 991199 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 1047130 70727582 ~ 70738226 (+)
G1481270 NA non-coding upstream 249 69679799 ~ 69679999 (+)
G1481266 NA non-coding upstream 8437 69671604 ~ 69671811 (+)
G1481263 NA non-coding upstream 19436 69660513 ~ 69660812 (+)
G1481235 NA non-coding upstream 52538 69627506 ~ 69627710 (+)
G1481209 LOC100194703 non-coding upstream 85943 69593976 ~ 69594305 (+)
G1481278 NA non-coding downstream 7814 69688266 ~ 69771848 (+)
G1481316 NA non-coding downstream 57644 69738096 ~ 69742749 (+)
G1481551 NA non-coding downstream 94964 69775416 ~ 69775630 (+)
G1481563 NA non-coding downstream 100817 69781269 ~ 69781673 (+)
G1481568 NA non-coding downstream 102942 69783394 ~ 69783611 (+)
G1480254 pad other upstream 681065 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1554468 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2016599 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2812368 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2845308 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1159168 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1498061 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1701492 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2624271 72304723 ~ 72305412 (+)

Expression


Co-expression Network