G1481278


Basic Information

Item Value
gene id G1481278
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69688266 ~ 69771848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1693980
caaatttggtttcatcagaccagagaatgttgtttctcatggtgtgagagttctttaggtgcattttgaaaaatccaagtgggctgtcatgtgccttttactgaggagtggtttccatctggccactctaccataaaggcctgattggtggagtgctgcagagatggttgtccttctggaaggttctcccatctacacagaggaaggtattgggtgtagattgatgcgGGAAATGTTCACACTCTTGAAGGGTGTGCATTACTGTTTTACAGATGTCTGCAGCCAAAGTCTACCATGACATTAAACGTAGTAGCCTATAAGTATTAAGGGTAGCACTTGTCATAAATCCAACTTGTAAAATGCATTGTGATATGTAATGCTGCATAATTCCCGTGGTTTCACTATCGTGGTACTGTATTAAATAGCTTGTTTAGGCAGACAAATGTTGATATAAATACATTCAATAT

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1693980 True 467 lncRNA 0.40 2 69688266 69771848

Neighbor

gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 258607 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 325748 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 333771 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 328523 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 649408 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 866356 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 899803 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 955734 70727582 ~ 70738226 (+)
G1481271 NA non-coding upstream 7814 69680248 ~ 69680452 (+)
G1481270 NA non-coding upstream 8267 69679799 ~ 69679999 (+)
G1481266 NA non-coding upstream 16455 69671604 ~ 69671811 (+)
G1481263 NA non-coding upstream 27454 69660513 ~ 69660812 (+)
G1481235 NA non-coding upstream 60556 69627506 ~ 69627710 (+)
G1481551 NA non-coding downstream 3568 69775416 ~ 69775630 (+)
G1481563 NA non-coding downstream 9421 69781269 ~ 69781673 (+)
G1481568 NA non-coding downstream 11546 69783394 ~ 69783611 (+)
G1481576 NA non-coding downstream 15409 69787257 ~ 69787487 (+)
G1481584 NA non-coding downstream 18030 69789878 ~ 69793133 (+)
G1480254 pad other upstream 689083 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1562486 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2024617 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2820386 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2853326 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1067772 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1406665 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1610096 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2532875 72304723 ~ 72305412 (+)

Expression


Co-expression Network