G1481584


Basic Information

Item Value
gene id G1481584
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 69789878 ~ 69793133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1694296
gctgctttttcttcactctgtggtccaacacttcccaaaccatctcaattgggttgaggtcgtgtgattttggaggccaggtcatctgatgcagcactccatcactcttcttcttggtcaaatagcccttacacagcctggaggtgtgttttgggtcattgtcctgttgaaaaacaaataatagtcccactaagcacaaaccagatgggatggcatattgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcgcaACATTgtgaccagcaaagcacccccacaccatcacacctcctcctccatgtttcagggtgggaaccacacatgcggagatcatccattcacctactctgcatctcacaaagacatggcggttgaaaCCCAAAATCTCTAATTTGAAATCAGGCCCAGAGGACAGAtgtccaccagtctaatgtccattgtttgtttttcttggccaaagcaagtctcttcttcttattggtgtcctttagtaatgttTTTTcccagcaattcaaccatgaagtatcacgccctgatctgtttcacctgtccctgtgattgtctGCACCCCCAGGTGTCActgattttccccagtgtatttatccctgtgttttctgtcttaCCAATGCCTCCGCTGTTTTCCAGGATTTGGTCAACGATGTGCTCCGGGACATGCTAAACCATTTTGTGTTCATTTACCTTGAAGACATCCTGTTTTTTTCCCGATCTGCCCAAGAACATGTACTTCATGTCAGACAGGTTcttcagcgcctcctggagaaccaattGTTTGTGAAAGCCGAGAAGTGTGTTCCACTGCTCTAtcacctttctgggatatgtcattgcTGAGGGCAATGATCAGAAAggagtggtggattggcctcaacctaCGTCCAGGGTGCAGTTGCAATGGTTTCTTGGTTTTGCTAACTTCAGTTTGATTTGGGATTACAGCACCCTGGTGGCCCCCCTCTCGGCACTCACCTCTTCCAAGGTACCGTTCAAATGGTCTCCAGCTGTCGACAAACcctttgtggacctgaagcatcgGTTCTTAACAGCTCCCAGCCTCATCCATCCGGACCCCTCACGTCAATTTGTGGTGGAAGTTGATGCTTCGGATTTTGGAGCGGGGGCCATGCTGTCCCAGCGATCTGCCCAGGACCAAAAGCTTCATCCCTGTGCTTTCTTGTCCCATCGTCTCAATCCTGcagagaggaactacgatgtAGGTAATCGAGAACTCCTGGAAGTTAAGGGTCAAACAATGTGAAGCCTATACAGTTCCTGcctatacagttcctctgccacaccCTTGACCTCCGAAACCATTCcccctacctcatgccttgctgCCAATGTGGATTCGGGTATTGAGAACCTGGTTCGCGAGGTGCAACGCTCCCAGCCTGGACCGTAGACTAGCCTTCCTCCGACaatgtttctggtggcccacaatggtTCCTGACTTCTCTGCCTTTGTCGCCGCATGCACAGTGTGTTCTCAAAACAAGACTCCACGGCAGGCTCATTCTGGCCTCCTTCAGCCACTACCGGTCCCTCATCGTCCCTGGTCTCATatctctggactttgtcactgggctcCCTCCATCTGATGGAAATACTGTCATTCTGACGGTAGTCGATCGGTTCTCCAAGGCCGCCCATTTCGtccctctccccaaactaccttctgccaaggagacggcccagcttatggtgcaggatgtcttccggatccatggactccgagtagacatggtctccgatcggggttctcgtctcagttctggaaggcattctgcacccttattgggtcgtcggccagcctgtcatCTGGATTCCATCCCCAAACCAATGgtcagtcggagcgagccaatcaAGATCTGGAAACCACCTTGAGATTCCTGGTCTCAATCAACCCGACTACCTGAAGCCGTCAACTGGTCTGGGTGGTGTATGCCCGGAACACCCTTCCCTGTTCTGCCATGGGACTCTCCCCTTTCGAGTGCTCCAGGTATCGTCGACAAGCGGACGGTCACCGCATTGGGCAGAGGGTTTGGCTTTCCACTCAGGACCAGCCTCTGTGGGTAGAGTCCCACAAACTGTCTCCCTGGTTCATAGGTACTTTCCCATCTCCAGAGTCCTGAGTTCCACTTCTGTCCGTATTGTGTTACCCTGTACCCTCTGTATCCACCATACTTTCCATGTGTCCAGAAATAAGCCTGTGTCTCACTGTcctttgtcttctgtttccagGCCCATCCCAACCCCCCGGGTAATCAATGGCCAGCCAGCATATAGGGTGAGATGCTTTCTGAAGGTTTAACCACGGGGCAGGGGTTttcagtacctggttgactgggagagtTATGGCCCAGGTGCGTCCCTGGgtggtgggggggtactgtcatgccctgatctgtttcacctgtccttgggattgtctccaccccctctagGTGTCGCTGatttctccccgtctctctgtgccagttcgtcttatatgtctttccaagtcaaccagagtttttcccattctcctgctttttgctattctcctttttctagtcctcccggttttgacccttgcctgtttctgtatccgcctgcctgaccattcagcctgccttgaccatgaacctgtctgccactctgtacctcctgtccacaaccattctcttgcctactccttttggattaataaacattgtaagacatGCAAGTAATAGCcgatttctgaagctggtaactcaaATGTaattatcctctacagcagaggtaactctgggtcatcctttcctgtggcgatcctcatgagggccagtttcatcatagcgcttaatggtttttgtgactgcacttgaagaaactttcaaagttcttgaaattttccctattgactgaccttcatgtcttaaaataatgatggactgtcgtttctctttgcttatttgagttgttcttgccgtaatatggacttggtcttttaccaaatagggctttcttaTGTAtacccaaccctaccttgtcacaacacaactgattggctcaaatgcattaaaaaggcaagaaattccacaaattaacatttaacaaggcacacctattaattgaaat

Function

NR:

description
PREDICTED: fibroblast growth factor receptor-like 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1694296 True 3152 lncRNA 0.49 2 69789878 69793133

Neighbor

gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 360219 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 427360 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 435383 69348885 ~ 69354495 (+)
LOC110494487 ptprg coding downstream 307238 70100371 ~ 70415005 (+)
c17h3orf14 cssa12h3orf14 coding downstream 628123 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 845071 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 878518 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 934449 70727582 ~ 70738226 (+)
G1481576 NA non-coding upstream 2391 69787257 ~ 69787487 (+)
G1481568 NA non-coding upstream 6267 69783394 ~ 69783611 (+)
G1481563 NA non-coding upstream 8205 69781269 ~ 69781673 (+)
G1481551 NA non-coding upstream 14248 69775416 ~ 69775630 (+)
G1481278 NA non-coding upstream 18030 69688266 ~ 69771848 (+)
G1481646 NA non-coding downstream 94635 69887768 ~ 69888059 (+)
G1481734 NA non-coding downstream 198724 69991857 ~ 69994114 (+)
G1481946 NA non-coding downstream 484120 70277253 ~ 70280126 (+)
G1481989 NA non-coding downstream 543957 70337090 ~ 70368761 (+)
G1480254 pad other upstream 790695 68934326 ~ 68999183 (+)
G1479621 NA other upstream 1664098 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2126229 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 2921998 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 2954938 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 1046487 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 1385380 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1588811 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2511590 72304723 ~ 72305412 (+)

Expression


Co-expression Network