G1481946



Basic Information


Item Value
gene id G1481946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70277253 ~ 70280126 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1694668
atcacttttgccttatggcaagtgtcacaccctggtcaaagtattttgtgtttatctttatttatttggtcaggccagggtgtggcatgggtttttgtatgtggtgtgtatgtgtggggattgtagctagtggggtgttctagctaagtctatggctgtctgaagtggttctcaatcagaggcaggtgtttatcgttgtctctgattgggaaccatatttaggcagccatattctttgagttggtcgtggg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1694668 True 251 lncRNA 0.44 2 70277253 70280126

Neighbor


gene id symbol gene type direction distance location
LOC110494482 LOC106565858 coding upstream 847594 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 914735 69360279 ~ 69362518 (+)
LOC110494479 LOC106565861 coding upstream 922758 69348885 ~ 69354495 (+)
c17h3orf14 cssa12h3orf14 coding downstream 141130 70421256 ~ 70429407 (+)
nampt2 LOC106565851 coding downstream 358078 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 391525 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 447456 70727582 ~ 70738226 (+)
LOC110494492 mx2 coding downstream 467711 70747837 ~ 70759905 (+)
G1481734 NA non-coding upstream 283139 69991857 ~ 69994114 (+)
G1481646 NA non-coding upstream 389194 69887768 ~ 69888059 (+)
G1481584 NA non-coding upstream 484120 69789878 ~ 69793133 (+)
G1481576 NA non-coding upstream 489766 69787257 ~ 69787487 (+)
G1481568 NA non-coding upstream 493642 69783394 ~ 69783611 (+)
G1481989 NA non-coding downstream 56964 70337090 ~ 70368761 (+)
LOC110494487 ptprg non-coding downstream 133124 70100371 ~ 70415005 (+)
G1482021 NA non-coding downstream 135280 70415406 ~ 70415684 (+)
G1482033 fezf2 non-coding downstream 159190 70439316 ~ 70440807 (+)
G1482038 NA non-coding downstream 170000 70450126 ~ 70450343 (+)
G1480254 pad other upstream 1278070 68934326 ~ 68999183 (+)
G1479621 NA other upstream 2151473 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2613604 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 3409373 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 3442313 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 559494 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 898387 71178513 ~ 71180429 (+)
G1483638 NA other downstream 1101818 71381944 ~ 71382272 (+)
G1484782 NA other downstream 2024597 72304723 ~ 72305412 (+)

Expression



Co-expression Network