G1482043


Basic Information

Item Value
gene id G1482043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70459075 ~ 70459309 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1694767
gaatcGCACCTGTTGTTAGATGGGAAaaaataaaagcagacattgaatatccctttgagcatgataaagttattaattacactttggatggtgttttAATACATCCAGTccatacaaagatacaggcatccttcctaactcagttgctggagaggaaggaaactgctcagggatttcaccatgaggccaatggtgactttaaaacagttacagagtttagtggttgtgataggag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1694767 True 235 lncRNA 0.39 1 70459075 70459309

Neighbor

gene id symbol gene type direction distance location
c17h3orf14 cssa12h3orf14 coding upstream 29668 70421256 ~ 70429407 (+)
LOC110494487 ptprg coding upstream 44083 70100371 ~ 70415005 (+)
LOC110494482 LOC106565858 coding upstream 1029416 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 1096557 69360279 ~ 69362518 (+)
LOC118940682 NA coding upstream 1105180 69353820 ~ 69353895 (+)
nampt2 LOC106565851 coding downstream 178895 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 212342 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 268273 70727582 ~ 70738226 (+)
LOC110494492 mx2 coding downstream 288528 70747837 ~ 70759905 (+)
LOC110494493 mx1 coding downstream 318143 70777452 ~ 70783111 (+)
G1482038 NA non-coding upstream 8732 70450126 ~ 70450343 (+)
G1482033 fezf2 non-coding upstream 18268 70439316 ~ 70440807 (+)
G1482021 NA non-coding upstream 43391 70415406 ~ 70415684 (+)
G1481989 NA non-coding upstream 90314 70337090 ~ 70368761 (+)
G1482046 NA non-coding downstream 3427 70462736 ~ 70525606 (+)
G1482059 NA non-coding downstream 24623 70483932 ~ 70484312 (+)
G1482106 NA non-coding downstream 90660 70549969 ~ 70550515 (+)
G1482725 NA non-coding downstream 160363 70619672 ~ 70619879 (+)
G1482728 NA non-coding downstream 163579 70622888 ~ 70623220 (+)
G1480254 pad other upstream 1459892 68934326 ~ 68999183 (+)
G1479621 NA other upstream 2333295 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2795426 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 3591195 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 3624135 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 380311 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 719204 71178513 ~ 71180429 (+)
G1483638 NA other downstream 922635 71381944 ~ 71382272 (+)
G1484782 NA other downstream 1845414 72304723 ~ 72305412 (+)

Expression


Co-expression Network