G1482106


Basic Information

Item Value
gene id G1482106
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70549969 ~ 70550515 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1694835
agattataacagaacatggccaagatgttcaaatgttcataaatgaccagcatggtcgaacaacaataaggcagaacagttgaaactggagcagcagcacggccaggcgGACCGGGGACAGCAAGGAGCCACCACGCCAGGCACTCCCGGGGCACGGTCCCAGGgcccaggtcctccgagagagagaaagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccgaataggacaggagaagtactccagatataacaaactgaccctagccccccg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1694835 True 295 lncRNA 0.53 2 70549969 70550515

Neighbor

gene id symbol gene type direction distance location
c17h3orf14 cssa12h3orf14 coding upstream 120562 70421256 ~ 70429407 (+)
LOC110494487 ptprg coding upstream 134977 70100371 ~ 70415005 (+)
LOC110494482 LOC106565858 coding upstream 1120310 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 1187451 69360279 ~ 69362518 (+)
LOC118940682 NA coding upstream 1196074 69353820 ~ 69353895 (+)
nampt2 LOC106565851 coding downstream 87689 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 121136 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 177067 70727582 ~ 70738226 (+)
LOC110494492 mx2 coding downstream 197322 70747837 ~ 70759905 (+)
LOC110494493 mx1 coding downstream 226937 70777452 ~ 70783111 (+)
G1482046 NA non-coding upstream 24363 70462736 ~ 70525606 (+)
G1482059 NA non-coding upstream 65657 70483932 ~ 70484312 (+)
G1482043 NA non-coding upstream 90660 70459075 ~ 70459309 (+)
G1482038 NA non-coding upstream 99626 70450126 ~ 70450343 (+)
G1482033 fezf2 non-coding upstream 109162 70439316 ~ 70440807 (+)
G1482725 NA non-coding downstream 69157 70619672 ~ 70619879 (+)
G1482728 NA non-coding downstream 72373 70622888 ~ 70623220 (+)
G1482737 NA non-coding downstream 76326 70626841 ~ 70627200 (+)
slc2a9l1 LOC106565846 non-coding downstream 301413 70851928 ~ 70944023 (+)
G1482873 NA non-coding downstream 389916 70940431 ~ 70940734 (+)
G1480254 pad other upstream 1550786 68934326 ~ 68999183 (+)
G1479621 NA other upstream 2424189 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2886320 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 3682089 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 3715029 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 289105 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 627998 71178513 ~ 71180429 (+)
G1483638 NA other downstream 831429 71381944 ~ 71382272 (+)
G1484782 NA other downstream 1754208 72304723 ~ 72305412 (+)

Expression


Co-expression Network