G1482728


Basic Information

Item Value
gene id G1482728
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 70622888 ~ 70623220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1695503
ggggacaccgtgcgcctcatggcataacacggtgcctgcccggtccctctctctccacggtaagcacgggaagttggcgcaggtctcctacctgacttcgccacactccccgtgtgccccctccaatacatttttggggctgcctctcgggcttccagctgcgctgccgtgctgcctcctcataccggcgcctctcagctttcgctgcccccagctctgccttggggcggcgatattccccagcctgtgcccagggtcctttgccgtccaggatctcctcccaagtccagttcTCCAGGTATCGCTGCCTCTcgtcaccacgctgcttggtcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1695503 True 333 lncRNA 0.64 1 70622888 70623220

Neighbor

gene id symbol gene type direction distance location
c17h3orf14 cssa12h3orf14 coding upstream 193481 70421256 ~ 70429407 (+)
LOC110494487 ptprg coding upstream 207896 70100371 ~ 70415005 (+)
LOC110494482 LOC106565858 coding upstream 1193229 69371687 ~ 69429659 (+)
LOC110494481 spcs1 coding upstream 1260370 69360279 ~ 69362518 (+)
LOC118940682 NA coding upstream 1268993 69353820 ~ 69353895 (+)
nampt2 LOC106565851 coding downstream 14984 70638204 ~ 70656059 (+)
LOC110494491 synpr coding downstream 48431 70671651 ~ 70712982 (+)
mx2 mx2 coding downstream 104362 70727582 ~ 70738226 (+)
LOC110494492 mx2 coding downstream 124617 70747837 ~ 70759905 (+)
LOC110494493 mx1 coding downstream 154232 70777452 ~ 70783111 (+)
G1482725 NA non-coding upstream 3009 70619672 ~ 70619879 (+)
G1482106 NA non-coding upstream 72373 70549969 ~ 70550515 (+)
G1482046 NA non-coding upstream 97282 70462736 ~ 70525606 (+)
G1482059 NA non-coding upstream 138576 70483932 ~ 70484312 (+)
G1482043 NA non-coding upstream 163579 70459075 ~ 70459309 (+)
G1482737 NA non-coding downstream 3621 70626841 ~ 70627200 (+)
slc2a9l1 LOC106565846 non-coding downstream 228708 70851928 ~ 70944023 (+)
G1482873 NA non-coding downstream 317211 70940431 ~ 70940734 (+)
G1482959 NA non-coding downstream 452146 71075366 ~ 71075569 (+)
G1482961 NA non-coding downstream 454187 71077407 ~ 71077707 (+)
G1480254 pad other upstream 1623705 68934326 ~ 68999183 (+)
G1479621 NA other upstream 2497108 68122538 ~ 68125780 (+)
G1478504 NA other upstream 2959239 67661987 ~ 67663649 (+)
LOC110494429 LOC106565956 other upstream 3755008 66867211 ~ 66867881 (+)
iffo2b LOC106565910 other upstream 3787948 66798767 ~ 66840370 (+)
LOC110494494 atxn7 other downstream 216400 70809971 ~ 70847390 (+)
G1483346 LOC106565841 other downstream 555293 71178513 ~ 71180429 (+)
G1483638 NA other downstream 758724 71381944 ~ 71382272 (+)
G1484782 NA other downstream 1681503 72304723 ~ 72305412 (+)

Expression


Co-expression Network