G1483989


Basic Information

Item Value
gene id G1483989
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 71691922 ~ 71692164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1696909
TTAGTTTAGAGAGAACATCCCTGTACCCTGGAGTATAATGTCAGACCTGTACTATTTCCACACTAAGCAGCCCAGGGAGAATTCattatgtattgtagatgggATGTTTGGTAATGTGTGATTCCCATTGGAGTGTTCTCTGCGTATTTGTATTATTAACCATATGAAAGTGAGGTTCATCAAAGGCGGCTTAGGTTTGACAAACTTTTTTTTAACCCTCATACTACCAACAGGGGTAATTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1696909 True 243 lncRNA 0.39 1 71691922 71692164

Neighbor

gene id symbol gene type direction distance location
LOC110493246 LOC106565837 coding upstream 3267 71678389 ~ 71688655 (+)
kbtbd8 LOC106565838 coding upstream 13906 71670655 ~ 71678016 (+)
slc25a26 slc25a26 coding upstream 173556 71449660 ~ 71518366 (+)
LOC110494500 NA coding upstream 518678 71172013 ~ 71173244 (+)
slc2a9l1 LOC106565846 coding upstream 829795 70851928 ~ 70944023 (+)
LOC118940657 NA coding downstream 10481 71702645 ~ 71702701 (+)
LOC110494505 LOC102209545 coding downstream 287736 71979900 ~ 72221849 (+)
LOC110494508 LOC106565828 coding downstream 761195 72453359 ~ 72523767 (+)
LOC110494510 LOC106565827 coding downstream 854988 72547152 ~ 72585158 (+)
LOC110494511 LOC106565826 coding downstream 894624 72586788 ~ 72621297 (+)
G1483842 NA non-coding upstream 36139 71653122 ~ 71655783 (+)
G1483735 NA non-coding upstream 213179 71478468 ~ 71478743 (+)
G1483721 NA non-coding upstream 243684 71447907 ~ 71448238 (+)
G1484054 NA non-coding downstream 78643 71770807 ~ 71776235 (+)
G1484093 NA non-coding downstream 133266 71825430 ~ 71827175 (+)
G1484102 NA non-coding downstream 140613 71832777 ~ 71833688 (+)
G1484247 NA non-coding downstream 193917 71886081 ~ 71886293 (+)
G1484252 NA non-coding downstream 197527 71889691 ~ 71889952 (+)
G1483638 NA other upstream 309650 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 511493 71178513 ~ 71180429 (+)
LOC110494494 atxn7 other upstream 850692 70809971 ~ 70847390 (+)
nampt2 LOC106565851 other upstream 1035865 70638204 ~ 70656059 (+)
G1480254 pad other upstream 2692739 68934326 ~ 68999183 (+)
G1484782 NA other downstream 612559 72304723 ~ 72305412 (+)
G1484897 NA other downstream 762399 72454563 ~ 72454924 (+)
LOC110494525 LOC106565811 other downstream 1352573 73044346 ~ 73049958 (+)
G1485260 NA other downstream 1430662 73122826 ~ 73125356 (+)
G1485819 NA other downstream 1589096 73281260 ~ 73282019 (+)

Expression


Co-expression Network