G1484093


Basic Information

Item Value
gene id G1484093
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 71825430 ~ 71827175 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1697019
gagagagagagagagagagagagagcgaacacaTGGTGTGACAGAAGAACAGGGATACCAGGGATGTACAGTAGTTTATGCAAAGAGATGTTAAGCTATTGGATCACAAGTACAGTGAATGGTGAGAGGTTTCTTGTCAACATCTTTAGTAATTTGTAACATATGCTGTTGCAGAGCTCACAGTACTGTACCTTAAAGATGAGTTCTGGGGATTTGTCGGCAACCTCCTCTATGTCCATCCCACCCTGAGGACTGCCCACCATGACGGGGCCGTTGCAGGCCCGGTCCATCAGGATGGCAAAGTAGGTCTCTCTGGTGATGTCCAGGGCTTCAGCCACCATCACCTGGAAGTGTG

Function

NR:

description
succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1697019 True 355 lncRNA 0.49 2 71825430 71827175

Neighbor

gene id symbol gene type direction distance location
LOC118940657 NA coding upstream 122729 71702645 ~ 71702701 (+)
LOC110493246 LOC106565837 coding upstream 136775 71678389 ~ 71688655 (+)
kbtbd8 LOC106565838 coding upstream 147414 71670655 ~ 71678016 (+)
slc25a26 slc25a26 coding upstream 307064 71449660 ~ 71518366 (+)
LOC110494500 NA coding upstream 652186 71172013 ~ 71173244 (+)
LOC110494505 LOC102209545 coding downstream 152725 71979900 ~ 72221849 (+)
LOC110494508 LOC106565828 coding downstream 626184 72453359 ~ 72523767 (+)
LOC110494510 LOC106565827 coding downstream 719977 72547152 ~ 72585158 (+)
LOC110494511 LOC106565826 coding downstream 759613 72586788 ~ 72621297 (+)
LOC110494512 LOC106565824 coding downstream 774150 72601325 ~ 72612798 (+)
G1484054 NA non-coding upstream 49195 71770807 ~ 71776235 (+)
G1483989 NA non-coding upstream 133266 71691922 ~ 71692164 (+)
G1483842 NA non-coding upstream 169647 71653122 ~ 71655783 (+)
G1484102 NA non-coding downstream 5602 71832777 ~ 71833688 (+)
G1484247 NA non-coding downstream 58906 71886081 ~ 71886293 (+)
G1484252 NA non-coding downstream 62516 71889691 ~ 71889952 (+)
G1484288 NA non-coding downstream 113065 71940240 ~ 71985031 (+)
G1484294 NA non-coding downstream 119847 71947022 ~ 71947311 (+)
G1483638 NA other upstream 443158 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 645001 71178513 ~ 71180429 (+)
LOC110494494 atxn7 other upstream 984200 70809971 ~ 70847390 (+)
nampt2 LOC106565851 other upstream 1169373 70638204 ~ 70656059 (+)
G1480254 pad other upstream 2826247 68934326 ~ 68999183 (+)
G1484782 NA other downstream 477548 72304723 ~ 72305412 (+)
G1484897 NA other downstream 627388 72454563 ~ 72454924 (+)
LOC110494525 LOC106565811 other downstream 1217562 73044346 ~ 73049958 (+)
G1485260 NA other downstream 1295651 73122826 ~ 73125356 (+)
G1485819 NA other downstream 1454085 73281260 ~ 73282019 (+)

Expression


Co-expression Network