G1484768



Basic Information


Item Value
gene id G1484768
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 72271792 ~ 72272615 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1697733
TCACCTCTTGAATAACATAGTCAGAACTACAAATGTCTGATTATTCCATGCAAAACAATTGCGCACATTTAGCTCTAGATCAACAAAATGATACAGCAATAACTGCAGGCTTTTCATTGATCATGTCCTTTCAGATAGCCAACGTGAGGGTAGCCACACGATGTCTCTCAATATTGCCCAACAATAATTGGATATTTGAGTGATATAAAAGTTAACTTTACCTGACAAGTCTGAGTGGTTTAGGTTCATTTCCCATCCTTTGTGGGTTCTGCATTTGCCGATGTACTGTTAGCTGATAATGTTAACTTTGCAAGCTACCGGTAGAAACTTTGTGCAGTTTGTTAAACATAATGTTAAGTACACCTGATGTACCTTTTCTGGCAACCAACGTAGGCATACCTAGCGaagttagctaacattatcccCTCTTCAACATTGTTTTTATCACAATTGCGGCTGACAGACATGATAGGCTACATTGATTGATGAACCACAtcaaattggctagctagctaataacagaTCGTGTCAATATGGCTGTTTAACAAGCTTACTTTCAGGAGATAAACTAGGTGGCTAGCTATATCCAAATATTGTTTGATTTGCTGGCCATCTATAGTGGTGATGGCAGTAACGTAAGTCCGATCGACAATTTTACCAGGACGATGTCAAGCTCTTTCCAAAAGCCTAATCTCTGACGAAGCAAGCTAAAGTGGTATATtgtttgcttagctagctagttcTTTTCCAAATGGATAGGCTACTCTGATGTTAGATCTAAATGTGGAATCATGGGAAATGTGTAGTTGTGACTATGCTCTTCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1697733 True 824 lncRNA 0.39 1 72271792 72272615

Neighbor


gene id symbol gene type direction distance location
LOC110494505 LOC102209545 coding upstream 51718 71979900 ~ 72221849 (+)
LOC118940657 NA coding upstream 569091 71702645 ~ 71702701 (+)
LOC110493246 LOC106565837 coding upstream 583137 71678389 ~ 71688655 (+)
kbtbd8 LOC106565838 coding upstream 593776 71670655 ~ 71678016 (+)
slc25a26 slc25a26 coding upstream 753426 71449660 ~ 71518366 (+)
LOC110494508 LOC106565828 coding downstream 180744 72453359 ~ 72523767 (+)
LOC110494510 LOC106565827 coding downstream 274537 72547152 ~ 72585158 (+)
LOC110494511 LOC106565826 coding downstream 314173 72586788 ~ 72621297 (+)
LOC110494512 LOC106565824 coding downstream 328710 72601325 ~ 72612798 (+)
LOC110494513 LOC106565822 coding downstream 357707 72630322 ~ 72639097 (+)
G1484762 NA non-coding upstream 4175 72267377 ~ 72267617 (+)
G1484710 NA non-coding upstream 44165 72227409 ~ 72227627 (+)
G1484705 NA non-coding upstream 46295 72225170 ~ 72225497 (+)
G1484297 NA non-coding upstream 317836 71949974 ~ 71953956 (+)
G1484780 NA non-coding downstream 27739 72300354 ~ 72300666 (+)
G1484783 NA non-coding downstream 32910 72305525 ~ 72305727 (+)
G1484785 NA non-coding downstream 42508 72315123 ~ 72349495 (+)
G1484792 NA non-coding downstream 93771 72366386 ~ 72366940 (+)
G1484829 NA non-coding downstream 99250 72371865 ~ 72372723 (+)
G1483638 NA other upstream 889520 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 1091363 71178513 ~ 71180429 (+)
LOC110494494 atxn7 other upstream 1430562 70809971 ~ 70847390 (+)
nampt2 LOC106565851 other upstream 1615735 70638204 ~ 70656059 (+)
G1480254 pad other upstream 3272609 68934326 ~ 68999183 (+)
G1484782 NA other downstream 32108 72304723 ~ 72305412 (+)
G1484897 NA other downstream 181948 72454563 ~ 72454924 (+)
LOC110494525 LOC106565811 other downstream 772122 73044346 ~ 73049958 (+)
G1485260 NA other downstream 850211 73122826 ~ 73125356 (+)
G1485819 NA other downstream 1008645 73281260 ~ 73282019 (+)

Expression



Co-expression Network