G1485006


Basic Information

Item Value
gene id G1485006
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 72689644 ~ 72693477 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698014
aaaacagagggatgaagagggtaaaacagagggatgaagaggataaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagaggataaaacagagggatgaagagggtaaaacagagggatgaggagggtaaaacagagggatgatgagggtaaaacagagggatgaggagggtaaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagaggataaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagaggataaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagaggataaaacagagggatgaagaggataaaacagagggatgaagagggtaaAACATAGGGATGAAGAgggtaaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagaggataaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagaggataaaacagagggatgaagaggataaaacagagggtaaaacagagggatgaagaggataaaacagagggatgaagaagataaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagagggtaaaacagagggatgaagagggtaaaacagagggatgaagagaataaaacagagggatgaagaggataaAATAGAGGGATGAAGAAGATAAAACAGATTGATGAAGAGGGTAAAACATAGGGATGAAGAggataaaacagagggatgaagagggtaaaacagagggatgaagaggataaAACAGAGGGACGAAGAGtgtaaaacagagggatgaagagggtaaaacagagggatgaagaggatgaaacagagggatgaagagggtaaAACATAGGGATGAAGAGGATAAAACAGAGGGACGAAGAGtgtaaaacagagggatgaagaggataaaacagagggatgaagaggataaaacagagggatgaagaggataaaacagagggatgaagaggataaaacagagggatgaagagaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698014 True 1266 lncRNA 0.42 4 72689644 72693477

Neighbor

gene id symbol gene type direction distance location
LOC110494513 LOC106565822 coding upstream 50547 72630322 ~ 72639097 (+)
LOC110494511 LOC106565826 coding upstream 68347 72586788 ~ 72621297 (+)
LOC110494512 LOC106565824 coding upstream 76846 72601325 ~ 72612798 (+)
LOC110494510 LOC106565827 coding upstream 104486 72547152 ~ 72585158 (+)
LOC110494508 LOC106565828 coding upstream 165877 72453359 ~ 72523767 (+)
LOC110494516 LOC105017315 coding downstream 124691 72818168 ~ 72828562 (+)
LOC110494520 LOC106565815 coding downstream 168882 72862359 ~ 72864606 (+)
LOC110494525 LOC106565811 coding downstream 350869 73044346 ~ 73049958 (+)
LOC110494536 LOC106565804 coding downstream 673325 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 702263 73395740 ~ 73416687 (+)
G1484985 NA non-coding upstream 13977 72660006 ~ 72675667 (+)
G1484943 NA non-coding upstream 145201 72544161 ~ 72544443 (+)
G1484896 NA non-coding upstream 235488 72453953 ~ 72454156 (+)
G1484886 NA non-coding upstream 244921 72444508 ~ 72444723 (+)
G1484872 NA non-coding upstream 264084 72425316 ~ 72425560 (+)
G1485065 NA non-coding downstream 96594 72790071 ~ 72790947 (+)
G1485070 NA non-coding downstream 104418 72797895 ~ 72798215 (+)
G1485023 LOC106565817 non-coding downstream 153392 72846869 ~ 72852122 (+)
G1485196 NA non-coding downstream 329638 73023115 ~ 73036053 (+)
G1485233 NA non-coding downstream 394225 73087702 ~ 73087929 (+)
G1484897 NA other upstream 234720 72454563 ~ 72454924 (+)
G1484782 NA other upstream 384232 72304723 ~ 72305412 (+)
G1483638 NA other upstream 1307372 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 1509215 71178513 ~ 71180429 (+)
LOC110494494 atxn7 other upstream 1848414 70809971 ~ 70847390 (+)
G1485260 NA other downstream 429349 73122826 ~ 73125356 (+)
G1485819 NA other downstream 587783 73281260 ~ 73282019 (+)
G1486811 NA other downstream 1285413 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1695059 74388428 ~ 74432420 (+)

Expression


Co-expression Network