G1485238


Basic Information

Item Value
gene id G1485238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73094584 ~ 73094800 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698271
tatttacataagtattcagaccctttgctatgagactcgaaattgagctcaggtgcatcctgtttccattgatcaaccttgatatgtttctacgacttgattggagtatacctgtggtaaattcaattgattggacatgatttggaaaggaacacacgtctatataaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698271 True 217 lncRNA 0.40 1 73094584 73094800

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 44626 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 229978 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 266022 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 455487 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 481786 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 272002 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 300940 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 349950 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 961375 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 975261 74070061 ~ 74084580 (+)
G1485233 NA non-coding upstream 6655 73087702 ~ 73087929 (+)
G1485196 NA non-coding upstream 58531 73023115 ~ 73036053 (+)
G1485023 LOC106565817 non-coding upstream 242462 72846869 ~ 72852122 (+)
G1485070 NA non-coding upstream 296369 72797895 ~ 72798215 (+)
G1485065 NA non-coding upstream 303637 72790071 ~ 72790947 (+)
G1485257 NA non-coding downstream 24587 73119387 ~ 73119600 (+)
G1485258 NA non-coding downstream 25039 73119839 ~ 73120040 (+)
G1485782 NA non-coding downstream 147913 73242713 ~ 73249014 (+)
G1485783 NA non-coding downstream 148278 73243078 ~ 73248917 (+)
G1485801 NA non-coding downstream 167699 73262499 ~ 73263014 (+)
G1484897 NA other upstream 639660 72454563 ~ 72454924 (+)
G1484782 NA other upstream 789172 72304723 ~ 72305412 (+)
G1483638 NA other upstream 1712312 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 1914155 71178513 ~ 71180429 (+)
G1485260 NA other downstream 28026 73122826 ~ 73125356 (+)
G1485819 NA other downstream 186460 73281260 ~ 73282019 (+)
G1486811 NA other downstream 884090 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1293736 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3588799 76683599 ~ 76684020 (+)

Expression


Co-expression Network