G1485257


Basic Information

Item Value
gene id G1485257
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73119387 ~ 73119600 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698295
CTTCATACATTTAACAAGACACCAACATACACTTTACAAAACAGTCAGTGACCAAATTACTGACTGTCTGTGACCTATGGAGGGAATGATGATTGGCAGTTAAAATGTTGGACTAtcagaggtatggagggagagttaTTGCTGTTCCTGGCAGTGTCACTCCTTGGTTTAGAATTGATGGTGCACAAATAAAGCCATAGTGTCCCTCCAGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698295 True 214 lncRNA 0.42 1 73119387 73119600

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 69429 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 254781 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 290825 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 480290 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 506589 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 247202 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 276140 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 325150 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 936575 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 950461 74070061 ~ 74084580 (+)
G1485238 NA non-coding upstream 24587 73094584 ~ 73094800 (+)
G1485233 NA non-coding upstream 31458 73087702 ~ 73087929 (+)
G1485196 NA non-coding upstream 83334 73023115 ~ 73036053 (+)
G1485023 LOC106565817 non-coding upstream 267265 72846869 ~ 72852122 (+)
G1485070 NA non-coding upstream 321172 72797895 ~ 72798215 (+)
G1485258 NA non-coding downstream 239 73119839 ~ 73120040 (+)
G1485782 NA non-coding downstream 123113 73242713 ~ 73249014 (+)
G1485783 NA non-coding downstream 123478 73243078 ~ 73248917 (+)
G1485801 NA non-coding downstream 142899 73262499 ~ 73263014 (+)
G1485811 NA non-coding downstream 151795 73271395 ~ 73271657 (+)
G1484897 NA other upstream 664463 72454563 ~ 72454924 (+)
G1484782 NA other upstream 813975 72304723 ~ 72305412 (+)
G1483638 NA other upstream 1737115 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 1938958 71178513 ~ 71180429 (+)
G1485260 NA other downstream 3226 73122826 ~ 73125356 (+)
G1485819 NA other downstream 161660 73281260 ~ 73282019 (+)
G1486811 NA other downstream 859290 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1268936 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3563999 76683599 ~ 76684020 (+)

Expression


Co-expression Network