G1485258


Basic Information

Item Value
gene id G1485258
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73119839 ~ 73120040 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698296
GGGTTCCCAAACTTTTGGCCCCAACCTCattttgattaaataaataaaaatatgaagaaaaaaaacctgggaaaaaactgaaaagtttaatacacacactacagcagtctattacaaatcagtcgGACAGTACTTTTGACAGAATATGTgcatcatttgtatttattatggatccccactagttgctgccaaagcagcagct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698296 True 202 lncRNA 0.36 1 73119839 73120040

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 69881 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 255233 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 291277 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 480742 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 507041 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 246762 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 275700 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 324710 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 936135 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 950021 74070061 ~ 74084580 (+)
G1485257 NA non-coding upstream 239 73119387 ~ 73119600 (+)
G1485238 NA non-coding upstream 25039 73094584 ~ 73094800 (+)
G1485233 NA non-coding upstream 31910 73087702 ~ 73087929 (+)
G1485196 NA non-coding upstream 83786 73023115 ~ 73036053 (+)
G1485023 LOC106565817 non-coding upstream 267717 72846869 ~ 72852122 (+)
G1485782 NA non-coding downstream 122673 73242713 ~ 73249014 (+)
G1485783 NA non-coding downstream 123038 73243078 ~ 73248917 (+)
G1485801 NA non-coding downstream 142459 73262499 ~ 73263014 (+)
G1485811 NA non-coding downstream 151355 73271395 ~ 73271657 (+)
G1485815 NA non-coding downstream 154111 73274151 ~ 73274429 (+)
G1484897 NA other upstream 664915 72454563 ~ 72454924 (+)
G1484782 NA other upstream 814427 72304723 ~ 72305412 (+)
G1483638 NA other upstream 1737567 71381944 ~ 71382272 (+)
G1483346 LOC106565841 other upstream 1939410 71178513 ~ 71180429 (+)
G1485260 NA other downstream 2786 73122826 ~ 73125356 (+)
G1485819 NA other downstream 161220 73281260 ~ 73282019 (+)
G1486811 NA other downstream 858850 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1268496 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3563559 76683599 ~ 76684020 (+)

Expression


Co-expression Network