G1485815


Basic Information

Item Value
gene id G1485815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73274151 ~ 73274429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698917
ctccaaacatgatgagttgagtttttaccaaaaagttattttggtttcatctgaccatatgacattctctcaatctttttctggatcatccaaatgctctctagcaaacttcagacgggcctggacatgtactggcttaagcaggggacacgtctggcactgcaggatttgagtccctggcggcgtagtgtgttactgatggtaggctttgttactttggtcccagctctctgcaagtcattcactaggtcccgccgtgtggttctaggatttttgctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698917 True 279 lncRNA 0.46 1 73274151 73274429

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 224193 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 409545 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 445589 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 635054 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 661353 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 92373 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 121311 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 170321 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 781746 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 795632 74070061 ~ 74084580 (+)
G1485811 NA non-coding upstream 2494 73271395 ~ 73271657 (+)
G1485801 NA non-coding upstream 11137 73262499 ~ 73263014 (+)
G1485782 NA non-coding upstream 25137 73242713 ~ 73249014 (+)
G1485783 NA non-coding upstream 25234 73243078 ~ 73248917 (+)
G1485258 NA non-coding upstream 154111 73119839 ~ 73120040 (+)
G1485821 NA non-coding downstream 10484 73284913 ~ 73285159 (+)
G1485827 NA non-coding downstream 20171 73294600 ~ 73294822 (+)
G1485828 NA non-coding downstream 20527 73294956 ~ 73295164 (+)
G1485848 NA non-coding downstream 45679 73320108 ~ 73325594 (+)
G1485260 NA other upstream 148795 73122826 ~ 73125356 (+)
G1484897 NA other upstream 819227 72454563 ~ 72454924 (+)
G1484782 NA other upstream 968739 72304723 ~ 72305412 (+)
G1483638 NA other upstream 1891879 71381944 ~ 71382272 (+)
G1485819 NA other downstream 6831 73281260 ~ 73282019 (+)
G1486811 NA other downstream 704461 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1114107 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3409170 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4733861 78008290 ~ 78008799 (+)

Expression


Co-expression Network