G1485827


Basic Information

Item Value
gene id G1485827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73294600 ~ 73294822 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698929
ATAACTGATTGTGCCATCTTTAGcggcaatgactgcaaccaaatgatTCCTGTAGTTGTTAATCAGTCTCAGTCTGTTAATCagtcacatcgctgtggaggaattgtggcccactcttgcatgcagaaatgctttaactcagcaacatttgtgggttttcaagcatgaactacTCATTTTAAGTCCTGCCATAACATCTCAATTGAGATTAggtttggacttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698929 True 223 lncRNA 0.40 1 73294600 73294822

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 244642 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 429994 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 466038 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 655503 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 681802 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 71980 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 100918 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 149928 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 761353 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 775239 74070061 ~ 74084580 (+)
G1485821 NA non-coding upstream 9441 73284913 ~ 73285159 (+)
G1485815 NA non-coding upstream 20171 73274151 ~ 73274429 (+)
G1485811 NA non-coding upstream 22943 73271395 ~ 73271657 (+)
G1485801 NA non-coding upstream 31586 73262499 ~ 73263014 (+)
G1485782 NA non-coding upstream 45586 73242713 ~ 73249014 (+)
G1485828 NA non-coding downstream 134 73294956 ~ 73295164 (+)
G1485848 NA non-coding downstream 25286 73320108 ~ 73325594 (+)
G1485841 NA non-coding downstream 124962 73419784 ~ 73420295 (+)
G1485840 NA non-coding downstream 125592 73420414 ~ 73421285 (+)
G1485819 NA other upstream 12581 73281260 ~ 73282019 (+)
G1485260 NA other upstream 169244 73122826 ~ 73125356 (+)
G1484897 NA other upstream 839676 72454563 ~ 72454924 (+)
G1484782 NA other upstream 989188 72304723 ~ 72305412 (+)
G1486811 NA other downstream 684068 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1093714 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3388777 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4713468 78008290 ~ 78008799 (+)
G1491899 NA other downstream 4723546 78018368 ~ 78019816 (+)

Expression


Co-expression Network