G1485828


Basic Information

Item Value
gene id G1485828
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73294956 ~ 73295164 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698930
cattctcctgtagaattctctacagagcagaattcatggttccttctattaaaatcaaatcaaatcaaattgtattggtcatacacatatttagtagatgttattgtgggtgtagcgaaatgcttgtgttcctagctcccacagtgcagtagtatctaacaattcacaagaaaagagaatgatggtcaaaagataaaggagaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698930 True 209 lncRNA 0.34 1 73294956 73295164

Neighbor

gene id symbol gene type direction distance location
LOC110494525 LOC106565811 coding upstream 244998 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 430350 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 466394 72818168 ~ 72828562 (+)
LOC110494513 LOC106565822 coding upstream 655859 72630322 ~ 72639097 (+)
LOC110494512 LOC106565824 coding upstream 682158 72601325 ~ 72612798 (+)
LOC110494536 LOC106565804 coding downstream 71638 73366802 ~ 73384379 (+)
LOC110494537 LOC106565802 coding downstream 100576 73395740 ~ 73416687 (+)
taf4a LOC106565801 coding downstream 149586 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 761011 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 774897 74070061 ~ 74084580 (+)
G1485827 NA non-coding upstream 134 73294600 ~ 73294822 (+)
G1485821 NA non-coding upstream 9797 73284913 ~ 73285159 (+)
G1485815 NA non-coding upstream 20527 73274151 ~ 73274429 (+)
G1485811 NA non-coding upstream 23299 73271395 ~ 73271657 (+)
G1485801 NA non-coding upstream 31942 73262499 ~ 73263014 (+)
G1485848 NA non-coding downstream 24944 73320108 ~ 73325594 (+)
G1485841 NA non-coding downstream 124620 73419784 ~ 73420295 (+)
G1485840 NA non-coding downstream 125250 73420414 ~ 73421285 (+)
G1485897 NA non-coding downstream 135206 73430370 ~ 73430937 (+)
G1485819 NA other upstream 12937 73281260 ~ 73282019 (+)
G1485260 NA other upstream 169600 73122826 ~ 73125356 (+)
G1484897 NA other upstream 840032 72454563 ~ 72454924 (+)
G1484782 NA other upstream 989544 72304723 ~ 72305412 (+)
G1486811 NA other downstream 683726 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 1093372 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3388435 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4713126 78008290 ~ 78008799 (+)
G1491899 NA other downstream 4723204 78018368 ~ 78019816 (+)

Expression


Co-expression Network