G1485840


Basic Information

Item Value
gene id G1485840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73420414 ~ 73421285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1698944
atttgggtgaactatccctttaactggGCATAATATGAAACCCCATGCTTATTGTGTTCTCTCTATGAGGAGTTAGGGTCTGTTTGGTCAAAACAAAATTTGGTCTAGTTCAACCTTACGAGTCTACTGTATAATCAGCTCTCAACCCATATAAAACAATACaatcattgtatttgggacaaatcattcactaaaccctaaacctcatctAAATCTTATAATGAATAATGTGTCAATTTAACAAGTtcaggagactaaactgcttagTGTAACCCTAGACTGTAAACTGTCAGGGTCAAAACGTATTGATGCAGCGGTAACTAAGATTGGGAGAGTTTTGTCCGTGATAAGGCATTGCTCTGCTTTCTTGGCATCACAATCATTTAAACGAGTCCTACTGGCCCTAGTTTTAttacacctggactactgcccagttaCATGGTCAAGTGTCACAAAGAAGAACATAGGCAAATtacagttggcccagaacagagcagcacggctggcccttaaatgtacacggaggGCGGATATCAATAagattgacagcatcactacttgtctttgtgagaggtattgatgtGTTGAAGGCACCGAACTGTCTGTTCAAACAGCTAACACGCAGCTCAGATACCtgcaagacatgccaccaggggtctcttcacagtccccagaaacacacagtactacatagagccatgactacatggaactctcttccACATTAAGTATCTGAAGCGAGCAGtaaaatctgatttaaaaaaacaacagataAAATAATACCTCACGGCATAACGCGGACAGTGaagagacacacccacacacacacacaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1698944 True 834 lncRNA 0.41 2 73420414 73421285

Neighbor

gene id symbol gene type direction distance location
LOC110494537 LOC106565802 coding upstream 3727 73395740 ~ 73416687 (+)
LOC110494536 LOC106565804 coding upstream 36035 73366802 ~ 73384379 (+)
LOC110494525 LOC106565811 coding upstream 370456 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 555808 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 591852 72818168 ~ 72828562 (+)
taf4a LOC106565801 coding downstream 23465 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 634890 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 648776 74070061 ~ 74084580 (+)
LOC110494547 LOC106565793 coding downstream 729980 74151265 ~ 74184733 (+)
LOC118940492 NA coding downstream 768710 74189995 ~ 74192932 (+)
G1485841 NA non-coding upstream 119 73419784 ~ 73420295 (+)
G1485848 NA non-coding upstream 94820 73320108 ~ 73325594 (+)
G1485828 NA non-coding upstream 125250 73294956 ~ 73295164 (+)
G1485827 NA non-coding upstream 125592 73294600 ~ 73294822 (+)
G1485897 NA non-coding downstream 9085 73430370 ~ 73430937 (+)
G1485898 NA non-coding downstream 9668 73430953 ~ 73431204 (+)
G1485903 NA non-coding downstream 16716 73438001 ~ 73438273 (+)
G1485907 NA non-coding downstream 19770 73441055 ~ 73441907 (+)
G1486085 NA non-coding downstream 39430 73460715 ~ 73460920 (+)
G1485819 NA other upstream 138395 73281260 ~ 73282019 (+)
G1485260 NA other upstream 295058 73122826 ~ 73125356 (+)
G1484897 NA other upstream 965490 72454563 ~ 72454924 (+)
G1484782 NA other upstream 1115002 72304723 ~ 72305412 (+)
G1486811 NA other downstream 557605 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 967251 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3262314 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4587005 78008290 ~ 78008799 (+)
G1491899 NA other downstream 4597083 78018368 ~ 78019816 (+)

Expression


Co-expression Network