G1485898


Basic Information

Item Value
gene id G1485898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73430953 ~ 73431204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1699004
GCCAAGTGATTGTAGTTGGAAAGCATCTAGGAAACTAAAACGAGACAAAAAGCTAACGTTAAGGACAGTAAGTGAGGTGGAAAAACTGCATATCCATTTTCACACCCTTGCACTGTCCACTTTGGGCATGGGGTTGGCACTCCCAGCACTCCTGCCACGATAGACCCCTCAGAATCCACTGCCCCTCAGAAATCGACCCGGAACCCCAAACGTCTCCACATTCAGCGTCCTTTACTCCGCCCAGGTGGTCCT

Function

NR:

description
PREDICTED: protein LSM14 homolog B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1699004 True 252 lncRNA 0.51 1 73430953 73431204

Neighbor

gene id symbol gene type direction distance location
LOC110494537 LOC106565802 coding upstream 14266 73395740 ~ 73416687 (+)
LOC110494536 LOC106565804 coding upstream 46574 73366802 ~ 73384379 (+)
LOC110494525 LOC106565811 coding upstream 380995 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 566347 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 602391 72818168 ~ 72828562 (+)
taf4a LOC106565801 coding downstream 13546 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 624971 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 638857 74070061 ~ 74084580 (+)
LOC110494547 LOC106565793 coding downstream 720061 74151265 ~ 74184733 (+)
LOC118940492 NA coding downstream 758791 74189995 ~ 74192932 (+)
G1485897 NA non-coding upstream 16 73430370 ~ 73430937 (+)
G1485840 NA non-coding upstream 9668 73420414 ~ 73421285 (+)
G1485841 NA non-coding upstream 10658 73419784 ~ 73420295 (+)
G1485848 NA non-coding upstream 105359 73320108 ~ 73325594 (+)
G1485903 NA non-coding downstream 6797 73438001 ~ 73438273 (+)
G1485907 NA non-coding downstream 9851 73441055 ~ 73441907 (+)
G1486085 NA non-coding downstream 29511 73460715 ~ 73460920 (+)
G1486105 NA non-coding downstream 42532 73473736 ~ 73474399 (+)
G1486106 NA non-coding downstream 43450 73474654 ~ 73474915 (+)
G1485819 NA other upstream 148934 73281260 ~ 73282019 (+)
G1485260 NA other upstream 305597 73122826 ~ 73125356 (+)
G1484897 NA other upstream 976029 72454563 ~ 72454924 (+)
G1484782 NA other upstream 1125541 72304723 ~ 72305412 (+)
G1486811 NA other downstream 547686 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 957332 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3252395 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4577086 78008290 ~ 78008799 (+)
G1491899 NA other downstream 4587164 78018368 ~ 78019816 (+)

Expression


Co-expression Network