G1485907


Basic Information

Item Value
gene id G1485907
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 73441055 ~ 73441907 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1699013
caggatgtggcccagaagttaattgacagcatgccagggcggattgcagaggtcttgaaaaagaggGGGCAACACTACAAATAtggactctttgcatcaacttcatgtaattgtcaataaaagcctttgacacttaagaaatgcttgtaattatacttcatgtaacggatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagatcttgaagtagtagttccccttgctctgcaagggccgtggcttttgtggagcgatgggtaacgacgcttcgtaggcgtcagttgttgatgtgtgcagaaggtccctggttcgcgcccgggtatgggcgaggggacggtttaaaaattatactgttacattgatgctgttgacccggattactggttgctgcggaaaaaaggaggaaggtcaaaaggggtgtaacggatgtgaaacggctagcttagttagcgtgggcgctaaatagcgtttcaatcagtgacgtcacttgctctgagatcttgaagtagtagttcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1699013 True 558 lncRNA 0.47 2 73441055 73441907

Neighbor

gene id symbol gene type direction distance location
LOC110494537 LOC106565802 coding upstream 24368 73395740 ~ 73416687 (+)
LOC110494536 LOC106565804 coding upstream 56676 73366802 ~ 73384379 (+)
LOC110494525 LOC106565811 coding upstream 391097 73044346 ~ 73049958 (+)
LOC110494520 LOC106565815 coding upstream 576449 72862359 ~ 72864606 (+)
LOC110494516 LOC105017315 coding upstream 612493 72818168 ~ 72828562 (+)
taf4a LOC106565801 coding downstream 2843 73444750 ~ 73457632 (+)
LOC110494542 LOC106565797 coding downstream 614268 74056175 ~ 74066815 (+)
LOC110494543 LOC100136421 coding downstream 628154 74070061 ~ 74084580 (+)
LOC110494547 LOC106565793 coding downstream 709358 74151265 ~ 74184733 (+)
LOC118940492 NA coding downstream 748088 74189995 ~ 74192932 (+)
G1485903 NA non-coding upstream 2782 73438001 ~ 73438273 (+)
G1485898 NA non-coding upstream 9851 73430953 ~ 73431204 (+)
G1485897 NA non-coding upstream 10118 73430370 ~ 73430937 (+)
G1485840 NA non-coding upstream 19770 73420414 ~ 73421285 (+)
G1485841 NA non-coding upstream 20760 73419784 ~ 73420295 (+)
G1486085 NA non-coding downstream 18808 73460715 ~ 73460920 (+)
G1486105 NA non-coding downstream 31829 73473736 ~ 73474399 (+)
G1486106 NA non-coding downstream 32747 73474654 ~ 73474915 (+)
G1486221 NA non-coding downstream 221535 73663442 ~ 73663848 (+)
G1486225 NA non-coding downstream 227164 73669071 ~ 73671902 (+)
G1485819 NA other upstream 159036 73281260 ~ 73282019 (+)
G1485260 NA other upstream 315699 73122826 ~ 73125356 (+)
G1484897 NA other upstream 986131 72454563 ~ 72454924 (+)
G1484782 NA other upstream 1135643 72304723 ~ 72305412 (+)
G1486811 NA other downstream 536983 73978890 ~ 73979435 (+)
LOC110493252 LOC106565788 other downstream 946629 74388428 ~ 74432420 (+)
G1490016 NA other downstream 3241692 76683599 ~ 76684020 (+)
G1491886 NA other downstream 4566383 78008290 ~ 78008799 (+)
G1491899 NA other downstream 4576461 78018368 ~ 78019816 (+)

Expression


Co-expression Network