G1487295


Basic Information

Item Value
gene id G1487295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74484274 ~ 74507789 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700530
ggacagttctgacctagaatatgtggacaactacaaatacctaggtgtctggttagactgtaaactctccttccagactcacattaagcatctccaatccaaaattaaatgtaGAATTGGCtagaaagcatccttcactcatgctgccaaacataccctcgtaaaactgaccatcctaccgatcctcgacttcagtgatgtcatctataaaatagcctccaacactctactcaacaaactggatgcagtctatcacagtgctgtccgttttgtcaccaaagtcccatacactacccaccattgcgacatGTCAtcattggttggccctcgcttcatactcgtcgccaaaccgactggctacaggttatctataagtctttgctagataaagccccgccttatctcagctcactggtcaccatagcagcacccactcgtagcacgcgctccagcaggtatatctcactggtcagcCCCAAAGCCAATCCCTCCTTTgttcgtctttccttccagttctctgctgccaatgactggaacgaactgcaaaaatctctgaagctggagactcgtatctccctcactagctttaagcaccagctgtcagagcagctcacagatcactgcacctgtacatagcccatctgtaaacagcccatctatctacctacctcatccccatacagtatttatttatttatcttgctcctttgcaccccagtatctctacttgcacagtcatcttctgcacatctaccattccagtgtttaattgctatattgtaattacttcgccaccatagcctatgtattgccttaactcccttatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700530 True 827 lncRNA 0.46 2 74484274 74507789

Neighbor

gene id symbol gene type direction distance location
LOC110494551 NA coding upstream 28740 74435617 ~ 74455534 (+)
LOC110493252 LOC106565788 coding upstream 51854 74388428 ~ 74432420 (+)
LOC110493251 LOC106565789 coding upstream 97113 74313191 ~ 74387161 (+)
LOC118940492 NA coding upstream 291342 74189995 ~ 74192932 (+)
LOC110494547 LOC106565793 coding upstream 299541 74151265 ~ 74184733 (+)
LOC110493253 LOC106565927 coding downstream 2992 74510781 ~ 74517438 (+)
LOC110494553 LOC106565783 coding downstream 9884 74517673 ~ 74529873 (+)
LOC110494557 LOC106565945 coding downstream 110028 74617817 ~ 74622094 (+)
LOC110494558 LOC106565781 coding downstream 118196 74625985 ~ 74635714 (+)
LOC110494561 LOC106565779 coding downstream 136389 74644178 ~ 74656005 (+)
G1487267 NA non-coding upstream 67865 74415825 ~ 74416409 (+)
G1487264 NA non-coding upstream 71844 74412135 ~ 74412430 (+)
G1487149 NA non-coding upstream 201982 74282067 ~ 74282292 (+)
G1487325 NA non-coding downstream 38633 74546422 ~ 74555701 (+)
G1487372 NA non-coding downstream 134890 74642679 ~ 74643086 (+)
G1487346 NA non-coding downstream 148889 74656678 ~ 74657334 (+)
G1487345 NA non-coding downstream 149634 74657423 ~ 74657775 (+)
G1487375 NA non-coding downstream 152702 74660491 ~ 74660795 (+)
G1486811 NA other upstream 504839 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1202255 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1358918 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1438686 73044346 ~ 73049958 (+)
G1490016 NA other downstream 2175810 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3500501 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3510579 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3681223 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3744840 78252629 ~ 78253308 (+)

Expression


Co-expression Network