G1487449


Basic Information

Item Value
gene id G1487449
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74494930 ~ 74505657 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700699
TAGCTTTATTTAGTAGCACAGTAGTATAAATGAGTTGAATCAGCAGACAGTGGGAAGCACCACTGACCCTCAGTGAAGACTGAACACATTTCCACATCATAACAGGCTGAAGTTGTTATTCATTGTCTATGTCTACTCAAGAGATGAGTCAACAGACTAAAAAAACTACAAAAGTGTAAAACAGAAAAAGATGACATCAATTACGAagaaaaagcatttttaaaacacACAGATGAAAGGAACTTTTAATCTACACAATCACATTGGCCCACAGTTCTTTCCTATTGCCTTTATTTATGCTTTTCCATATTCCTCCTAAAAAGCAAGTATATGTCCTAGTCCAACCATAATCCTCTGCATTCATTCTGTGAATTGGGCCACTATATATTTgttaatgtgttttttttgtcacatacacctggGAAAAGAACACAATGCagagaaatgtattgaaaatcaTGAATATTATGTTTTGTACCCAGCTTgagtgatcattctacagtgtgAATGGAGTGACTCGGCAGAACAGAGCAATGCAgcaaggtacagtacagtatatcacaCATCTACACTTTGCCACACAATCAAAGGAGGCGTGTGTTCACAGTTCACAACGTAAAAAATATCAATTAAAAAAGTGGTCTAAATATGTGCAATGAATGTAGGTATTTAGTGTAATTGTGTTCTAGATAAGAGGAATAGAGAAGGACTGAGGAGGGAGTGTGTGTTTGGGCTACAGTGGATGTGAGAGATGGGACTCTTCAACCCCTCCTGTGACGCAGGAACCAATcctctacacacagacacatggtgaaccaaataaataaaatacgAGAAAGGCAATAATGGGAAAAACAAAATAAGAGGGACATAAGGTAATTGAATCTGGAAGAGTAAGTCTCCAGATTCACTTTGCACAAGGAGACATGCACACCTATCAAATGAAAGGTGGGGGATTGTACCATCTCTAGACCCTTTGCGTATACAGTGTATGTATATCTGACTCATTCTTTATTTTGTCCCCTCCGCTTGTGAATGGAAGTTTGACGTGTATACAGTATAATATTTAATATGCATTTGTATATATATTCTCATATTAATCACACAATTCATCACATAACCCCCTGGGATTGAGTAATTTAGgagcagggttggagagagagacagggagacataaGTTACTGGAGGAGGATAGGGGCACCACTGAGGGCTGCTACCCAGTGTGGAGTGAGGAAGAGATAGGGAGGTTTAGCAGGAGACCTCCATGGTCTGGGGCCCAGGCTGGTTGTCCAGACCCCCGGTGGTGTTGGCTCCCTCCAGCAGGTTGTTGATGTTGCGGCTGCGGCTGCTGTCCATGGAGGTGATGCTGGTAGAGGAGGTAAGCCTCCACAATCAGCCAtct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700699 True 1402 lncRNA 0.41 2 74494930 74505657

Neighbor

gene id symbol gene type direction distance location
LOC110494548 LOC106565791 coding downstream 304980 74188736 ~ 74189950 (-)
LOC118936308 LOC106565794 coding downstream 359926 74124858 ~ 74135004 (-)
LOC110494546 LOC106565794 coding downstream 368338 74116396 ~ 74126592 (-)
LOC110494545 LOC106565795 coding downstream 380151 74086476 ~ 74114779 (-)
LOC110495191 kcnkf coding downstream 451766 74040320 ~ 74043164 (-)
LOC110495192 NA coding upstream 27761 74533418 ~ 74534609 (-)
LOC110494555 NA coding upstream 39562 74545219 ~ 74557600 (-)
LOC110494556 snai coding upstream 91648 74597305 ~ 74601837 (-)
LOC110494559 LOC106565778 coding upstream 151764 74657421 ~ 74674678 (-)
LOC110494563 LOC106565776 coding upstream 207988 74713645 ~ 74715681 (-)
G1487456 NA non-coding downstream 62818 74430762 ~ 74432112 (-)
G1487458 NA non-coding downstream 64843 74429831 ~ 74430087 (-)
G1487455 LOC106565788 non-coding downstream 68367 74425936 ~ 74426563 (-)
G1487448 NA non-coding downstream 76861 74417838 ~ 74418069 (-)
G1487447 NA non-coding downstream 77212 74417499 ~ 74417718 (-)
G1487576 NA non-coding upstream 167838 74673495 ~ 74673733 (-)
G1487596 NA non-coding upstream 198536 74704193 ~ 74704478 (-)
G1487603 NA non-coding upstream 205947 74711604 ~ 74712070 (-)
G1487609 NA non-coding upstream 216777 74722434 ~ 74722637 (-)
G1487454 LOC106565788 other downstream 71045 74422647 ~ 74423885 (-)
G1487442 NA other downstream 84940 74408968 ~ 74409990 (-)
LOC110494541 LOC106565798 other downstream 1017618 73473726 ~ 73824081 (-)
LOC110494535 LOC106565947 other downstream 1101531 73389357 ~ 73393639 (-)
LOC110494532 LOC106565803 other downstream 1232658 73257684 ~ 73267411 (-)
G1487599 NA other upstream 201688 74707345 ~ 74707609 (-)
G1487872 NA other upstream 393734 74899391 ~ 74899747 (-)
G1488266 NA other upstream 758063 75263720 ~ 75264223 (-)
G1488708 NA other upstream 1019525 75525182 ~ 75525596 (-)
G1490147 NA other upstream 2191139 76696796 ~ 76698096 (-)

Expression


Co-expression Network