G1487346


Basic Information

Item Value
gene id G1487346
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74656678 ~ 74657334 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700584
tggtatattggccatataccacaaacctccgaggtgccttattgcttaagatTGTCCATTTGCACTTGAGGGCATGTTTCTGAGCTGGGATCCATTCAACATGAGCAATAACTGAGGCTGATTGGACTGATATGCATAATGATTTCAGCATTGTTCAATAAATATCATCAGTAAGGCAAACATCTGCAGATTTTGGATATCCTCTCGTAACAAAGGTATCTAAAATGTCTTACATCTTTAAACCCATTATTATGCATTCTTTCATGTCCCTAGACTTAAGTATGGAAAATCATTCGAAGGACCAGTGAAATGCCATTTCAAAAGTAGCTAGTGATCAGGCCTTGTTAGATTTGGAGTCCCAAGATCGAGCTGTTCATATTGACATAGGCCTACACAATACAGTTTTGTATGTCTCTGATTACAACTTGCCAAATACAGTACACTGGAAATAATGATTATAGACTTCTGCTGCCATGGCAGCAAGAGCTCAATTTCCCTAACCAATTGATTTTTCTTGTTGGCATGTAGTTCTTAATGGAGAGAACAGTGCATCAACTTGTCCTCTACCAGTAGATGGCACTACCTGTGTTTATAAAATAACCTGCCAATTCTTTGTTTGTCAATTCTTCAATGCAATTTATGTAAATTAGTACACCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700584 True 657 lncRNA 0.38 1 74656678 74657334

Neighbor

gene id symbol gene type direction distance location
LOC110494561 LOC106565779 coding upstream 673 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 20964 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 34584 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 126805 74517673 ~ 74529873 (+)
LOC110493253 LOC106565927 coding upstream 139240 74510781 ~ 74517438 (+)
LOC110494562 LOC106565780 coding downstream 18156 74675490 ~ 74681473 (+)
adnpa LOC106565775 coding downstream 78887 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 88853 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 111298 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 182214 74839548 ~ 74842075 (+)
G1487372 NA non-coding upstream 13592 74642679 ~ 74643086 (+)
G1487325 NA non-coding upstream 100977 74546422 ~ 74555701 (+)
G1487295 NA non-coding upstream 148889 74484274 ~ 74507789 (+)
LOC110493252 LOC106565788 non-coding upstream 224557 74388428 ~ 74432420 (+)
G1487267 NA non-coding upstream 240269 74415825 ~ 74416409 (+)
G1487345 NA non-coding downstream 89 74657423 ~ 74657775 (+)
G1487375 NA non-coding downstream 3157 74660491 ~ 74660795 (+)
G1487377 NA non-coding downstream 9426 74666760 ~ 74667072 (+)
G1487379 NA non-coding downstream 11381 74668715 ~ 74669020 (+)
G1487380 NA non-coding downstream 11955 74669289 ~ 74669488 (+)
G1486811 NA other upstream 677243 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1374659 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1531322 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1611090 73044346 ~ 73049958 (+)
G1490016 NA other downstream 2026265 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3350956 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3361034 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3531678 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3595295 78252629 ~ 78253308 (+)

Expression


Co-expression Network