G1487345


Basic Information

Item Value
gene id G1487345
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74657423 ~ 74657775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700583
GTTTCTCAGTGAGTATTTATTCAGTAAAGATTCAAAGTGTAGAAAGGATGATACAACAGTGCTTTTTGATCAAACTATTTCATAAAAGTTAAAGTGATCATAACACCGTAAGTCCAGATTTGTTTATATCATTTTCCTGACCAAAATAAATTGGTAACATTCACAAGTGCATACACTGCTGGTAGGAGATCGCCTCCAATTTGGATGGTATAGCACCGTTCTTCGCTTATTTAGCAGCTTATCAGAGATGCAGCTTTGTAGGATTTATGTAGTGACTACGTTTGTATGAAAATTCAGTAGAGTGAAAAGATCTCTTCATTTGGCTCTCTAGCTAGCACAAGACCTACCTCTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700583 True 353 lncRNA 0.36 1 74657423 74657775

Neighbor

gene id symbol gene type direction distance location
LOC110494561 LOC106565779 coding upstream 1418 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 21709 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 35329 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 127550 74517673 ~ 74529873 (+)
LOC110493253 LOC106565927 coding upstream 139985 74510781 ~ 74517438 (+)
LOC110494562 LOC106565780 coding downstream 17715 74675490 ~ 74681473 (+)
adnpa LOC106565775 coding downstream 78446 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 88412 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 110857 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 181773 74839548 ~ 74842075 (+)
G1487346 NA non-coding upstream 89 74656678 ~ 74657334 (+)
G1487372 NA non-coding upstream 14337 74642679 ~ 74643086 (+)
G1487325 NA non-coding upstream 101722 74546422 ~ 74555701 (+)
G1487295 NA non-coding upstream 149634 74484274 ~ 74507789 (+)
LOC110493252 LOC106565788 non-coding upstream 225302 74388428 ~ 74432420 (+)
G1487375 NA non-coding downstream 2716 74660491 ~ 74660795 (+)
G1487377 NA non-coding downstream 8985 74666760 ~ 74667072 (+)
G1487379 NA non-coding downstream 10940 74668715 ~ 74669020 (+)
G1487380 NA non-coding downstream 11514 74669289 ~ 74669488 (+)
G1487394 NA non-coding downstream 35163 74692938 ~ 74693142 (+)
G1486811 NA other upstream 677988 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1375404 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1532067 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1611835 73044346 ~ 73049958 (+)
G1490016 NA other downstream 2025824 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3350515 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3360593 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3531237 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3594854 78252629 ~ 78253308 (+)

Expression


Co-expression Network