G1487377


Basic Information

Item Value
gene id G1487377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 74666760 ~ 74667072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1700623
caggtgtttgaaaaatgttaAATTCTCCATCTTCTGGACCGGGGGCCTATCCCCCTTCCAGACCAACCCCCAGCCATCCTCACGTACTTTGTGCCCCGTCAGATTTTTGGGGTGCATGATGCCTATCCATCCATGAATACCCCCTTTGTACTGTAAAACACTCACGCATGACATTCCTCACAATTGCTTAAAATTTCACATATGCACGCACACCCCTTAATGCAGTTTGAAACCGCTTCAGGACACAGGTCAGTGATTTCCGCTTATTCTGTTTCTACAGTTATGTAGCTAAATATCTCATAATGATTGTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1700623 True 313 lncRNA 0.44 1 74666760 74667072

Neighbor

gene id symbol gene type direction distance location
LOC110494561 LOC106565779 coding upstream 10755 74644178 ~ 74656005 (+)
LOC110494558 LOC106565781 coding upstream 31046 74625985 ~ 74635714 (+)
LOC110494557 LOC106565945 coding upstream 44666 74617817 ~ 74622094 (+)
LOC110494553 LOC106565783 coding upstream 136887 74517673 ~ 74529873 (+)
LOC110493253 LOC106565927 coding upstream 149322 74510781 ~ 74517438 (+)
LOC110494562 LOC106565780 coding downstream 8418 74675490 ~ 74681473 (+)
adnpa LOC106565775 coding downstream 69149 74736221 ~ 74741481 (+)
LOC110494565 LOC106565774 coding downstream 79115 74746187 ~ 74749119 (+)
LOC118940106 NA coding downstream 101560 74768632 ~ 74770253 (+)
opn1sw2 LOC100135984 coding downstream 172476 74839548 ~ 74842075 (+)
G1487375 NA non-coding upstream 5965 74660491 ~ 74660795 (+)
G1487345 NA non-coding upstream 8985 74657423 ~ 74657775 (+)
G1487346 NA non-coding upstream 9426 74656678 ~ 74657334 (+)
G1487372 NA non-coding upstream 23674 74642679 ~ 74643086 (+)
G1487325 NA non-coding upstream 111059 74546422 ~ 74555701 (+)
G1487379 NA non-coding downstream 1643 74668715 ~ 74669020 (+)
G1487380 NA non-coding downstream 2217 74669289 ~ 74669488 (+)
G1487394 NA non-coding downstream 25866 74692938 ~ 74693142 (+)
G1487407 LOC106565776 non-coding downstream 46175 74713247 ~ 74715641 (+)
G1487411 NA non-coding downstream 52851 74719923 ~ 74720488 (+)
LOC110493252 LOC106565788 other upstream 257571 74388428 ~ 74432420 (+)
G1486811 NA other upstream 687325 73978890 ~ 73979435 (+)
G1485819 NA other upstream 1384741 73281260 ~ 73282019 (+)
G1485260 NA other upstream 1541404 73122826 ~ 73125356 (+)
LOC110494525 LOC106565811 other upstream 1621172 73044346 ~ 73049958 (+)
G1490016 NA other downstream 2016527 76683599 ~ 76684020 (+)
G1491886 NA other downstream 3341218 78008290 ~ 78008799 (+)
G1491899 NA other downstream 3351296 78018368 ~ 78019816 (+)
G1491963 NA other downstream 3521940 78189012 ~ 78190290 (+)
G1492003 NA other downstream 3585557 78252629 ~ 78253308 (+)

Expression


Co-expression Network